Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC7Q96M83 AC008127.2-201ENST00000549925 1075 ntBASIC3.32□□□□□ -1.88
CCDC7Q96M83 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC7Q96M83 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC7Q96M83 AL022067.1-201ENST00000602426 454 ntBASIC3.32□□□□□ -1.88
CCDC7Q96M83 AL606834.3-201ENST00000602615 496 ntBASIC3.32□□□□□ -1.88
CCDC7Q96M83 AC112220.2-201ENST00000605513 533 ntBASIC3.32□□□□□ -1.88
CCDC7Q96M83 AL137847.3-201ENST00000611521 109 ntBASIC3.32□□□□□ -1.88
CCDC7Q96M83 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CCDC7Q96M83 AC008083.4-201ENST00000615076 444 ntBASIC3.32□□□□□ -1.88
CCDC7Q96M83 AC048347.1-201ENST00000624621 427 ntBASIC3.32□□□□□ -1.88
CCDC7Q96M83 MTND2P41-201ENST00000637599 773 ntBASIC3.32□□□□□ -1.88
CCDC7Q96M83 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC7Q96M83 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC7Q96M83 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC7Q96M83 RNA5SP258-201ENST00000362750 119 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC7Q96M83 RNU6-657P-201ENST00000383904 107 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 RNU6-1181P-201ENST00000384191 106 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 MIR764-201ENST00000390811 85 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC7Q96M83 RAP1BP1-201ENST00000412709 553 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC7Q96M83 RPL21P66-201ENST00000426566 466 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC006548.1-201ENST00000427470 102 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC018634.1-201ENST00000437554 401 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC091179.1-201ENST00000461606 579 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 RPL7P5-201ENST00000471472 736 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC104982.1-201ENST00000478775 574 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 LINC00888-204ENST00000487386 421 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC079203.1-201ENST00000487972 404 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC7Q96M83 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC026436.1-201ENST00000510537 270 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC093752.1-206ENST00000511823 336 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 SNORA19.3-201ENST00000516165 130 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC010376.1-201ENST00000522101 334 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AP001189.2-201ENST00000527320 189 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC078814.3-201ENST00000553036 491 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC7Q96M83 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC7Q96M83 DEFB122-202ENST00000569013 197 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 MIR3908-201ENST00000579798 126 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC7Q96M83 AP001350.1-201ENST00000601906 1524 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 AC006329.2-201ENST00000611491 394 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 CR381572.1-201ENST00000625098 102 ntBASIC3.31□□□□□ -1.88
CCDC7Q96M83 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC7Q96M83 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC7Q96M83 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC7Q96M83 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC7Q96M83 RNU6-1249P-201ENST00000363237 111 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 SUGT1P1-201ENST00000379514 476 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 RNU1-73P-201ENST00000383971 164 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 SNORD65.1-201ENST00000390889 71 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 RNU6-821P-201ENST00000390995 107 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 AL024474.1-201ENST00000404655 591 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC7Q96M83 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC7Q96M83 ATG3P1-201ENST00000419507 911 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC7Q96M83 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 AC079776.3-201ENST00000450665 370 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 RPS20P24-201ENST00000457473 361 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 AC010285.1-201ENST00000470580 392 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 AC092436.1-201ENST00000506450 503 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC7Q96M83 RNU6-276P-201ENST00000516114 96 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 AC109635.4-202ENST00000531666 412 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC7Q96M83 YWHAZP1-201ENST00000556286 722 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC7Q96M83 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC7Q96M83 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC7Q96M83 AC004808.1-201ENST00000627671 721 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 AC241585.2-209ENST00000638217 143 ntBASIC3.3□□□□□ -1.88
CCDC7Q96M83 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC7Q96M83 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC7Q96M83 AC092881.1-201ENST00000638218 2733 ntBASIC3.29□□□□□ -1.88
CCDC7Q96M83 AC016769.3-201ENST00000396562 315 ntBASIC3.29□□□□□ -1.88
CCDC7Q96M83 MTND4P13-201ENST00000402078 1023 ntBASIC3.29□□□□□ -1.88
CCDC7Q96M83 RPL23AP47-201ENST00000408017 460 ntBASIC3.29□□□□□ -1.88
CCDC7Q96M83 RNU4-26P-201ENST00000410270 107 ntBASIC3.29□□□□□ -1.88
CCDC7Q96M83 DPH3P2-201ENST00000422618 250 ntBASIC3.29□□□□□ -1.88
CCDC7Q96M83 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC7Q96M83 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC7Q96M83 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC7Q96M83 RPS20P22-201ENST00000473700 357 ntBASIC3.29□□□□□ -1.88
CCDC7Q96M83 AC069528.1-202ENST00000482888 637 ntBASIC3.29□□□□□ -1.88
CCDC7Q96M83 SNORA31.20-201ENST00000517111 133 ntBASIC3.29□□□□□ -1.88
CCDC7Q96M83 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC7Q96M83 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC7Q96M83 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC7Q96M83 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms