Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX27Q96L92 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX27Q96L92 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNX27Q96L92 AC090337.1-201ENST00000579651 2074 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNX27Q96L92 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNX27Q96L92 MIR449A-201ENST00000362113 91 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 MIR423-201ENST00000362201 94 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 RNY4P34-201ENST00000364779 95 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX27Q96L92 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX27Q96L92 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 RPL21P17-201ENST00000397467 475 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 Z98941.1-201ENST00000407764 100 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 RN7SKP156-201ENST00000410308 342 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 COTL1P1-201ENST00000422309 375 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX27Q96L92 FTH1P6-201ENST00000430768 320 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX27Q96L92 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX27Q96L92 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX27Q96L92 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SNX27Q96L92 RPL7P24-201ENST00000493052 752 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX27Q96L92 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX27Q96L92 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX27Q96L92 RNU6-1095P-201ENST00000516148 108 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 SNORA18.6-201ENST00000516792 115 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.2□□□□□ -1.74
SNX27Q96L92 AP003181.2-201ENST00000528941 181 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.2□□□□□ -1.74
SNX27Q96L92 AC034105.3-201ENST00000565294 442 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX27Q96L92 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 CKS1BP3-201ENST00000600888 237 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 AC068790.3-201ENST00000602988 553 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 XIAPP1-201ENST00000603162 600 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 AC011468.4-201ENST00000603942 409 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 AL136363.2-201ENST00000604173 851 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 RNU6-87P-201ENST00000607561 108 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX27Q96L92 AL591424.2-201ENST00000617023 128 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 AC006386.2-201ENST00000624491 75 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 AC012005.1-201ENST00000624575 75 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 AC092447.7-201ENST00000422212 1621 ntBASIC4.2□□□□□ -1.74
SNX27Q96L92 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
SNX27Q96L92 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX27Q96L92 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX27Q96L92 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX27Q96L92 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX27Q96L92 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX27Q96L92 RNU2-66P-201ENST00000410650 161 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX27Q96L92 MTCO1P21-201ENST00000416634 589 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AL137014.1-201ENST00000420490 1226 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX27Q96L92 HSPD1P21-201ENST00000436541 245 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AC073614.1-201ENST00000438690 650 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 RPS17P13-201ENST00000448974 407 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 FDX1P2-201ENST00000450769 375 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 HMGB3P22-202ENST00000451823 572 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.19□□□□□ -1.74
SNX27Q96L92 SNRPGP5-201ENST00000456003 220 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AP000926.1-201ENST00000479573 241 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 MTND1P3-201ENST00000484956 952 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AC055855.1-201ENST00000489563 579 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.19□□□□□ -1.74
SNX27Q96L92 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX27Q96L92 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX27Q96L92 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX27Q96L92 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX27Q96L92 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.19□□□□□ -1.74
SNX27Q96L92 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX27Q96L92 AL121603.1-201ENST00000553815 142 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AL356432.3-201ENST00000568952 465 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 OR4K8P-201ENST00000578842 1048 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
SNX27Q96L92 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.19□□□□□ -1.74
SNX27Q96L92 AC121334.2-201ENST00000605387 271 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AC005344.1-201ENST00000613391 459 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AC008121.2-201ENST00000614647 523 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AC112204.3-201ENST00000623822 332 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 AC110994.2-201ENST00000635481 492 ntBASIC4.19□□□□□ -1.74
SNX27Q96L92 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX27Q96L92 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SNX27Q96L92 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SNX27Q96L92 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX27Q96L92 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SNX27Q96L92 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms