Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SNORD116.3-201ENST00000517176 78 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 AC011853.1-201ENST00000518911 454 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.67□□□□□ -1.5
CALR3Q96L12 AP000676.2-201ENST00000529711 301 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.67□□□□□ -1.5
CALR3Q96L12 MED28P6-201ENST00000558776 231 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.67□□□□□ -1.5
CALR3Q96L12 AP000769.2-201ENST00000602344 396 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 AC104695.2-201ENST00000605056 775 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 MIR7109-201ENST00000613748 65 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CALR3Q96L12 RMST_4.1-201ENST00000616886 107 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 AC087588.2-201ENST00000617667 426 ntBASIC5.67□□□□□ -1.5
CALR3Q96L12 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.67□□□□□ -1.5
CALR3Q96L12 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CALR3Q96L12 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.67□□□□□ -1.5
CALR3Q96L12 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CALR3Q96L12 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CALR3Q96L12 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.66□□□□□ -1.5
CALR3Q96L12 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CALR3Q96L12 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CALR3Q96L12 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CALR3Q96L12 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CALR3Q96L12 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CALR3Q96L12 Y_RNA.33-201ENST00000362591 102 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 Y_RNA.80-201ENST00000362996 102 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CALR3Q96L12 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CALR3Q96L12 Y_RNA.496-201ENST00000384444 101 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 AL445529.1-201ENST00000398713 389 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 MIR548F4-201ENST00000408515 105 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 RNU6-55P-201ENST00000411092 107 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 OR2AT2P-201ENST00000413438 905 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.66□□□□□ -1.5
CALR3Q96L12 BMS1P17-202ENST00000416720 316 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 TOMM22P1-201ENST00000418578 312 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.66□□□□□ -1.5
CALR3Q96L12 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.66□□□□□ -1.5
CALR3Q96L12 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.66□□□□□ -1.5
CALR3Q96L12 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.66□□□□□ -1.5
CALR3Q96L12 GSTA11P-201ENST00000452866 669 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 AC104339.1-201ENST00000465478 348 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 RPL7P5-201ENST00000471472 736 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 RPS20P22-201ENST00000473700 357 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 DEFB109F-201ENST00000491870 277 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 AC018437.1-201ENST00000492214 406 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.66□□□□□ -1.5
CALR3Q96L12 ATP5F1P5-201ENST00000526403 760 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 HIGD1AP5-201ENST00000529959 259 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.66□□□□□ -1.5
CALR3Q96L12 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.66□□□□□ -1.5
CALR3Q96L12 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.66□□□□□ -1.5
CALR3Q96L12 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CALR3Q96L12 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.66□□□□□ -1.5
CALR3Q96L12 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.66□□□□□ -1.5
CALR3Q96L12 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.66□□□□□ -1.5
CALR3Q96L12 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.66□□□□□ -1.5
CALR3Q96L12 SNORD39.4-201ENST00000620099 78 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 AC138305.3-201ENST00000624988 240 ntBASIC5.66□□□□□ -1.5
CALR3Q96L12 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CALR3Q96L12 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CALR3Q96L12 MUC2-202ENST00000613187 4845 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 AC114947.2-201ENST00000565748 2125 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.65□□□□□ -1.5
CALR3Q96L12 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.65□□□□□ -1.5
CALR3Q96L12 RNA5SP46-201ENST00000362370 120 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 RNA5SP433-201ENST00000364491 114 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 RNU1-115P-201ENST00000365329 160 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 RNU6-842P-201ENST00000384269 107 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 MIR1290-201ENST00000408735 78 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 SYF2P2-201ENST00000417620 583 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.65□□□□□ -1.5
CALR3Q96L12 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.65□□□□□ -1.5
CALR3Q96L12 AC105399.1-202ENST00000447303 205 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.65□□□□□ -1.5
CALR3Q96L12 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.65□□□□□ -1.5
CALR3Q96L12 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.65□□□□□ -1.5
CALR3Q96L12 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.65□□□□□ -1.5
CALR3Q96L12 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.65□□□□□ -1.5
CALR3Q96L12 MIR892C-201ENST00000516410 77 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 AF186190.1-201ENST00000517470 480 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.65□□□□□ -1.5
CALR3Q96L12 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.65□□□□□ -1.5
CALR3Q96L12 COX6CP5-201ENST00000527162 228 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.65□□□□□ -1.5
CALR3Q96L12 TRAV37-201ENST00000553906 342 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.65□□□□□ -1.5
CALR3Q96L12 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.65□□□□□ -1.5
CALR3Q96L12 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.65□□□□□ -1.5
CALR3Q96L12 AL161616.1-201ENST00000611867 286 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 AC073593.1-201ENST00000624500 411 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 BMS1P21-201ENST00000634565 365 ntBASIC5.65□□□□□ -1.5
CALR3Q96L12 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.65□□□□□ -1.51
CALR3Q96L12 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CALR3Q96L12 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.65□□□□□ -1.51
CALR3Q96L12 AL136964.1-201ENST00000622038 2990 ntBASIC5.65□□□□□ -1.51
CALR3Q96L12 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CALR3Q96L12 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CALR3Q96L12 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms