Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL356321.1-201ENST00000621360 228 ntBASIC4□□□□□ -1.77
VPS50Q96JG6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS50Q96JG6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS50Q96JG6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS50Q96JG6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS50Q96JG6 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 RNU6-1249P-201ENST00000363237 111 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 RNU1-64P-201ENST00000365443 163 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 RNY3P13-201ENST00000365542 102 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 Y_RNA.381-201ENST00000365666 102 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC097374.1-203ENST00000400783 485 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 CIR1P3-201ENST00000405137 479 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 OR1AA1P-201ENST00000419597 916 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS50Q96JG6 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 COX6B1P7-201ENST00000430845 235 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS50Q96JG6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 RPS17P13-201ENST00000448974 407 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC007967.1-201ENST00000455422 1159 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 RN7SL691P-201ENST00000494487 301 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC105914.1-201ENST00000511798 226 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 SUB1P2-201ENST00000556401 297 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC011451.2-201ENST00000604303 598 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC067959.1-201ENST00000604334 379 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AL109618.2-201ENST00000605527 211 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC007038.2-201ENST00000608095 740 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC103710.3-201ENST00000608157 948 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC245517.5-201ENST00000611529 162 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC006338.1-201ENST00000618453 749 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 AC244258.1-201ENST00000637553 1071 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS50Q96JG6 GABPAP-201ENST00000419271 1356 ntBASIC3.99□□□□□ -1.77
VPS50Q96JG6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS50Q96JG6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 OR1S2-201ENST00000302592 978 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 Y_RNA.9-201ENST00000362354 101 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 Y_RNA.390-201ENST00000383932 102 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AC068050.1-201ENST00000394891 380 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 RPL7P60-201ENST00000397636 735 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AL583834.1-201ENST00000406943 343 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 RNA5SP36-201ENST00000410197 133 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 Y_RNA.604-201ENST00000410574 102 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 ELOCP14-201ENST00000428070 331 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 RPL21P112-201ENST00000434403 463 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 RPS15AP9-201ENST00000439856 381 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 ELOCP7-201ENST00000439968 331 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AL353572.1-201ENST00000442490 417 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 RAD23BP3-201ENST00000454157 1152 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 AC023598.1-201ENST00000472521 361 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AC116353.2-201ENST00000505332 712 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 AC093824.1-201ENST00000508796 343 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AC010493.1-201ENST00000513479 292 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 OR5AQ1P-201ENST00000527596 927 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS50Q96JG6 OR8R1P-201ENST00000543943 764 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AC126177.3-201ENST00000551839 688 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 MIR4286-201ENST00000580651 93 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS50Q96JG6 KC877982.1-201ENST00000602313 470 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AP001429.1-201ENST00000602568 530 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AP000907.4-201ENST00000604143 237 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AL591034.3-201ENST00000605511 685 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AP002360.4-201ENST00000606980 481 ntBASIC3.98□□□□□ -1.77
VPS50Q96JG6 AP001596.2-201ENST00000608410 312 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms