Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 RPL23AP84-201ENST00000571193 464 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC015917.1-201ENST00000579654 510 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC040904.1-201ENST00000590850 223 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AL022161.1-201ENST00000604390 213 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AC004067.1-201ENST00000608733 700 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 AL392088.2-201ENST00000637607 285 ntBASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM5Q96HC4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AL356421.1-201ENST00000403255 413 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AL356967.1-201ENST00000406305 431 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 RNA5SP107-201ENST00000411358 122 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 TPMTP3-201ENST00000411928 735 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 VN1R108P-201ENST00000431580 830 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC092573.2-201ENST00000434546 243 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 MTND2P4-201ENST00000445034 1004 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AL031183.1-201ENST00000457667 207 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 MEMO1P3-201ENST00000459811 302 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 RPS27P29-201ENST00000463110 252 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 LTV1P1-201ENST00000510683 1237 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 OR5BM1P-201ENST00000512021 366 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 RNA5SP216-201ENST00000516111 123 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 RNU1-45P-201ENST00000517191 141 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 OR7K1P-201ENST00000546439 926 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC125611.2-201ENST00000551907 647 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC245008.1-201ENST00000608123 476 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 uc_338.1-201ENST00000612113 180 ntBASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PDLIM5Q96HC4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 RNA5SP197-201ENST00000363357 119 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 SNORA4.1-201ENST00000364263 144 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 RNU6-1207P-201ENST00000384343 107 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 AC025750.1-201ENST00000399891 379 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 MTCYBP38-201ENST00000417160 1123 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 BX890604.2-201ENST00000427883 474 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 ZYG11AP1-201ENST00000430329 837 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 AC118469.1-201ENST00000442943 488 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 AC009237.8-201ENST00000445492 379 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 Z99127.3-201ENST00000448158 395 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 AC125238.1-201ENST00000448842 249 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 RPL30P6-201ENST00000475925 342 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 AC006499.5-201ENST00000505037 514 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 AC005178.1-201ENST00000508392 440 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 MTCO3P28-201ENST00000513351 515 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 HMGB1P14-201ENST00000557424 591 ntBASIC3.26□□□□□ -1.89
PDLIM5Q96HC4 AL845331.3-202ENST00000562856 261 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms