Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC091135.1-201ENST00000585943 307 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AL034351.1-201ENST00000605288 668 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 LARP7P1-201ENST00000605576 316 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC024940.5-201ENST00000622889 474 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AP003122.6-201ENST00000623831 495 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 AC099654.5-201ENST00000636479 350 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 MIR492-201ENST00000638676 116 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 MTND4P12-201ENST00000498999 1377 ntBASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.85□□□□□ -1.79
CTHRC1Q96CG8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 RNU6-996P-201ENST00000365438 107 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 RNU6-641P-201ENST00000384006 107 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 MIR135A2-201ENST00000384854 100 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AL136372.1-201ENST00000403060 228 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 RNU6-373P-201ENST00000411247 98 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 RPL21P24-201ENST00000413752 448 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 RPL21P111-201ENST00000418453 477 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC099677.1-201ENST00000420575 175 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC092017.2-201ENST00000427600 362 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AL121601.2-201ENST00000438019 707 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC005094.1-201ENST00000440420 368 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 NDUFS5P3-201ENST00000450668 321 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 RPL7P19-201ENST00000469948 618 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 RPS27AP1-201ENST00000475545 471 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 RN7SL604P-201ENST00000492589 296 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC026427.2-201ENST00000506228 536 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 LRRC34P2-201ENST00000514850 553 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 RNU7-143P-201ENST00000516781 65 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 RNU6-835P-201ENST00000516974 104 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 TOMM20P2-201ENST00000540082 421 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC018630.1-201ENST00000541376 925 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC123904.3-201ENST00000547218 814 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC090616.5-202ENST00000582111 297 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC025946.2-201ENST00000603398 234 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC104260.1-201ENST00000616660 539 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AC243312.2-201ENST00000623340 601 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 MIR4275-201ENST00000636486 87 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 GABPAP-201ENST00000419271 1356 ntBASIC3.84□□□□□ -1.79
CTHRC1Q96CG8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.84□□□□□ -1.8
CTHRC1Q96CG8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.84□□□□□ -1.8
CTHRC1Q96CG8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 Y_RNA.70-201ENST00000362886 110 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 RNU6-1155P-201ENST00000363554 107 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 RNU6-1284P-201ENST00000363701 100 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 Y_RNA.255-201ENST00000364581 97 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 SNORD3H-201ENST00000384486 214 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 MIR454-201ENST00000390180 115 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AL356776.1-201ENST00000406574 447 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AL583834.1-201ENST00000406943 343 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 RWDD4P2-201ENST00000426392 563 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AL358472.1-201ENST00000431295 329 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC098614.3-201ENST00000438957 440 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AL138799.3-201ENST00000438968 350 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 MTCYBP18-201ENST00000501056 747 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms