Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SRRM1P2-201ENST00000464531 1192 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AL049830.2-201ENST00000480072 201 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TM9SF4Q92544 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC005921.1-201ENST00000510589 286 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 RAC1P2-201ENST00000511164 579 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 MTND1P5-201ENST00000517906 940 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC007991.1-201ENST00000522680 631 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC103843.2-201ENST00000530523 682 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 OR8L1P-201ENST00000534005 955 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC011611.1-201ENST00000552179 197 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC245505.1-201ENST00000556398 224 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC027807.1-201ENST00000559921 996 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 OR4G1P-201ENST00000588632 938 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC006116.10-201ENST00000591836 581 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC112191.3-201ENST00000604371 277 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 SNORA62.6-201ENST00000606322 83 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 RNU1-30P-201ENST00000606575 163 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC091965.4-201ENST00000607691 587 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC131902.3-201ENST00000611767 581 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC079684.1-201ENST00000621405 437 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AL133383.2-201ENST00000622958 2336 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF4Q92544 AL049781.1-201ENST00000623195 3585 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC090337.1-201ENST00000579651 2074 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 AC092447.7-201ENST00000422212 1621 ntBASIC3.4□□□□□ -1.87
TM9SF4Q92544 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TM9SF4Q92544 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TM9SF4Q92544 CCT4P2-201ENST00000233836 1548 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 AF127577.6-201ENST00000623352 2191 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 MTCO1P17-201ENST00000411522 491 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 UBE2V1P10-201ENST00000414685 269 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 AIMP1P1-201ENST00000418670 937 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 BX842559.1-201ENST00000419615 532 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 PGBD4P3-201ENST00000440731 581 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 SNRPGP3-201ENST00000469405 227 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 OR5H5P-201ENST00000503164 928 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 AC138853.1-201ENST00000503549 823 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 AF213884.2-201ENST00000510417 903 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 AP003122.4-201ENST00000530980 758 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 AC016957.1-201ENST00000534895 309 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 RPL21P12-201ENST00000559810 515 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 AC037471.2-201ENST00000564941 598 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 AC009977.1-201ENST00000586015 570 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 RPL23AP92-201ENST00000603609 255 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 AL513477.2-201ENST00000607858 568 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 MTND5P3-201ENST00000438536 1800 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 AL365440.1-201ENST00000436135 2167 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF4Q92544 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TM9SF4Q92544 NUP58P1-201ENST00000502546 1738 ntBASIC3.39□□□□□ -1.87
TM9SF4Q92544 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.38□□□□□ -1.87
TM9SF4Q92544 AL049780.3-201ENST00000624612 1583 ntBASIC3.38□□□□□ -1.87
TM9SF4Q92544 AC027514.1-201ENST00000588561 1603 ntBASIC3.38□□□□□ -1.87
TM9SF4Q92544 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TM9SF4Q92544 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms