Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OR6C73P-201ENST00000546432 358 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.58□□□□□ -1.84
SNED1Q8TER0 MTCO1P40-201ENST00000574371 625 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC104763.2-201ENST00000604179 382 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AL031775.1-201ENST00000607014 887 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AL451074.6-201ENST00000608512 729 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.58□□□□□ -1.84
SNED1Q8TER0 Z99129.1-201ENST00000612510 255 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 AC087821.2-201ENST00000637086 450 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 FAM157B-203ENST00000639350 358 ntBASIC3.58□□□□□ -1.84
SNED1Q8TER0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.58□□□□□ -1.84
SNED1Q8TER0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.58□□□□□ -1.84
SNED1Q8TER0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SNED1Q8TER0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 Y_RNA.41-201ENST00000362646 102 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 RNU6-253P-201ENST00000384730 105 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 RPS15AP38-201ENST00000413110 372 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC027644.1-201ENST00000419595 298 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 AL022400.1-201ENST00000423946 935 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 MED14P1-201ENST00000430517 648 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 AL139415.2-201ENST00000431968 163 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNED1Q8TER0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 GTF2IP7-202ENST00000436677 309 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 PPIAP17-201ENST00000438507 471 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AP000873.1-201ENST00000463987 400 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 MTAPP1-201ENST00000489154 819 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC104685.1-201ENST00000502445 371 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 RN7SKP96-201ENST00000516948 297 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SNED1Q8TER0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SNED1Q8TER0 MIR5047-201ENST00000579212 100 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 MTND1P15-201ENST00000579262 949 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC090312.2-201ENST00000582687 378 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNED1Q8TER0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC095031.1-201ENST00000623685 672 ntBASIC3.57□□□□□ -1.84
SNED1Q8TER0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNED1Q8TER0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.57□□□□□ -1.84
SNED1Q8TER0 AC073544.1-201ENST00000600110 1595 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 SNORD56.3-201ENST00000363507 71 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 RNU6-931P-201ENST00000363850 107 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AL138878.1-201ENST00000405131 347 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 MTCYBP38-201ENST00000417160 1123 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNED1Q8TER0 EIF1P1-201ENST00000421436 341 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 DPPA2P1-201ENST00000428060 556 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 MYL8P-204ENST00000431574 518 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC234064.1-201ENST00000436312 247 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 BX276092.4-201ENST00000452056 248 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 KATNBL1P6-201ENST00000453433 915 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC087385.1-201ENST00000475062 312 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 HSPE1P23-201ENST00000509838 286 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC010587.2-201ENST00000511727 448 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 RNA5SP217-201ENST00000515959 91 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 RNU4-60P-201ENST00000517239 135 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 OR8L1P-201ENST00000534005 955 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 AP000403.1-201ENST00000603349 851 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 MTCYBP22-201ENST00000603788 447 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms