Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC078857.1-201ENST00000469870 667 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC008716.1-201ENST00000511084 513 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 NBEAP1-201ENST00000554452 979 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC112503.2-201ENST00000609005 552 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 MIR8084-201ENST00000614105 89 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC073968.1-201ENST00000618594 637 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 MIR6766-201ENST00000622641 72 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC002064.3-201ENST00000623448 346 ntBASIC2.2□□□□□ -2.06
LMX1AQ8TE12 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LMX1AQ8TE12 AC130650.2-201ENST00000618736 2403 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 RNU6-609P-201ENST00000365459 107 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 SNORA11.4-201ENST00000408823 129 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AL121882.1-201ENST00000422893 417 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AL645638.1-201ENST00000440519 361 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 MTND2P19-201ENST00000449129 1012 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 RNA5SP310-201ENST00000459084 116 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 SETP11-201ENST00000473027 690 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 RPL30P14-201ENST00000482744 348 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 TBCAP3-201ENST00000512475 312 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 SNRPGP16-201ENST00000533275 226 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AC125611.2-201ENST00000551907 647 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 SNRPGP1-201ENST00000553864 222 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AL356575.1-201ENST00000603008 283 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AC068313.1-201ENST00000604028 1008 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AC025588.3-201ENST00000604182 274 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 NUTF2P8-201ENST00000604593 363 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AL133507.1-201ENST00000605269 557 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.19□□□□□ -2.06
LMX1AQ8TE12 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.19□□□□□ -2.06
LMX1AQ8TE12 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 SNORD114-1-201ENST00000362705 72 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 RNU1-109P-201ENST00000383960 147 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 SNORA64-201ENST00000384674 134 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 RPS4XP3-201ENST00000398541 413 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 FO393413.1-201ENST00000402892 195 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 MIR1289-2-201ENST00000408360 111 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 RNU6-712P-201ENST00000410558 100 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 RPS15AP38-201ENST00000413110 372 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 HMGN2P30-201ENST00000423237 256 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 RPL7P55-201ENST00000450522 746 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AC027673.1-201ENST00000456245 405 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AC027338.1-201ENST00000514840 825 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AC087373.1-201ENST00000524920 491 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AP001804.3-201ENST00000525146 880 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AC090695.1-201ENST00000561269 1222 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 DEFB122-202ENST00000569013 197 ntBASIC2.18□□□□□ -2.06
LMX1AQ8TE12 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
LMX1AQ8TE12 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 FAM133CP-201ENST00000332869 704 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 MIR16-2-201ENST00000362117 81 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 RNU6-251P-201ENST00000363235 104 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 SNORA25.6-201ENST00000364121 118 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 SNORA67.3-201ENST00000384366 140 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AL591416.1-201ENST00000404015 867 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 BX664727.1-201ENST00000416024 466 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 Z98742.2-201ENST00000431564 187 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 TRBV26-201ENST00000456572 344 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms