Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SNORA31.26-201ENST00000517250 137 ntBASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 DUXAP2-201ENST00000519198 589 ntBASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 AC068587.4-201ENST00000533893 186 ntBASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 AC125611.2-201ENST00000551907 647 ntBASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 AP000254.1-201ENST00000609934 520 ntBASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 AC009464.1-201ENST00000615731 469 ntBASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRAF3IP1Q8TDR0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 SDAD1P2-201ENST00000441308 2028 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 MIR148B-201ENST00000362252 99 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 RNU5E-8P-201ENST00000363502 116 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 RNA5SP88-201ENST00000365560 109 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 RNU6-637P-201ENST00000384050 107 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 SNORA1.3-201ENST00000384676 136 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 RNU6-114P-201ENST00000384704 105 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 U3.20-201ENST00000390909 217 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 RNU6-754P-201ENST00000391166 107 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 RPS3AP26-201ENST00000398259 784 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 USP9YP36-201ENST00000424581 829 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AL159987.2-201ENST00000432754 307 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 UBE2V1P13-201ENST00000436983 439 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 LSM1P1-201ENST00000438629 273 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AL117351.1-201ENST00000438864 766 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 RNA5SP310-201ENST00000459084 116 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC008155.2-201ENST00000464337 397 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 HSPE1P6-201ENST00000479457 291 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AP002812.1-201ENST00000495378 474 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC118282.1-201ENST00000506408 765 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 POU5F1P7-201ENST00000508759 541 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC002456.2-201ENST00000509356 380 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 SNORA67.7-201ENST00000516664 135 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC087276.1-201ENST00000529659 480 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC090888.2-201ENST00000559765 1144 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 ZNF415P1-201ENST00000582279 1166 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 CKS1BP3-201ENST00000600888 237 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC245389.1-201ENST00000605141 529 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC008962.1-201ENST00000605729 304 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC034229.4-201ENST00000607861 441 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC004067.1-201ENST00000608733 700 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 MIR6076-201ENST00000617521 113 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC079597.1-201ENST00000624306 508 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC007490.1-201ENST00000624321 703 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 PCMTD1P7-201ENST00000634506 357 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AC009902.3-201ENST00000606235 2172 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 AL049781.1-201ENST00000623195 3585 ntBASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.29□□□□□ -1.88
TRAF3IP1Q8TDR0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 ATP5F1P3-201ENST00000397213 657 ntBASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 NDUFB4P7-201ENST00000423198 363 ntBASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 AC097713.2-201ENST00000430199 356 ntBASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 UBE2FP3-201ENST00000436366 524 ntBASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 AC106872.3-201ENST00000495104 446 ntBASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 HSPE1P23-201ENST00000509838 286 ntBASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 AC245166.1-201ENST00000521012 253 ntBASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 AP003461.1-201ENST00000528866 78 ntBASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.28□□□□□ -1.88
TRAF3IP1Q8TDR0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms