Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL035413.2-201ENST00000604801 525 ntBASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 AL158211.4-201ENST00000606988 584 ntBASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 AC099669.2-201ENST00000616549 437 ntBASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 YWHAEP7-203ENST00000622054 312 ntBASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 AC138649.5-201ENST00000637456 137 ntBASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCHCR1Q8TD31 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 Y_RNA.22-201ENST00000362492 102 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 Y_RNA.70-201ENST00000362886 110 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 RNU6-451P-201ENST00000362921 107 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 RNA5SP443-201ENST00000363083 132 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 SNORD56.2-201ENST00000363242 71 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 Y_RNA.381-201ENST00000365666 102 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 RNU6-356P-201ENST00000384140 107 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 RNU6-39P-201ENST00000384344 107 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 RNU6-278P-201ENST00000390945 109 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 RNU6-754P-201ENST00000391166 107 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 RPL35AP22-201ENST00000436855 335 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 SNRPEP8-201ENST00000442866 260 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AL356010.1-201ENST00000456364 102 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 RPL36AP13-201ENST00000457490 317 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC069499.1-201ENST00000489433 509 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 OR4R1P-201ENST00000529879 463 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC005255.1-201ENST00000593748 216 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AL031176.1-201ENST00000604554 466 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC128687.2-201ENST00000609657 566 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC069234.5-201ENST00000611056 416 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC093838.1-201ENST00000613014 469 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC104985.2-201ENST00000620598 500 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 BDP1P-201ENST00000582658 1990 ntBASIC4.34□□□□□ -1.71
CCHCR1Q8TD31 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CCHCR1Q8TD31 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 HSPA8P1-201ENST00000425843 1833 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 HSPE1P11-201ENST00000339579 310 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 RNU5E-8P-201ENST00000363502 116 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 SNORA69-201ENST00000383895 132 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 RNU6-606P-201ENST00000384721 111 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 MIR124-3-201ENST00000384866 87 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 RNU2-9P-201ENST00000410194 145 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 RNA5SP118-201ENST00000410385 109 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 RNU2-41P-201ENST00000410991 178 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 RNU6-516P-201ENST00000411381 104 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AC012498.1-201ENST00000424037 437 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 CKS1BP5-201ENST00000434172 273 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 RPS20P5-201ENST00000434808 360 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 DDX3P2-201ENST00000446138 111 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AC016696.1-201ENST00000446949 318 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AC009963.2-201ENST00000453431 138 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 RPS29P19-201ENST00000479709 171 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 RPL7P23-201ENST00000493874 747 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 CEACAMP10-202ENST00000495431 496 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AC068305.1-201ENST00000497406 726 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AC135721.1-201ENST00000497954 479 ntBASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.33□□□□□ -1.72
CCHCR1Q8TD31 SNORD27.1-201ENST00000516319 72 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms