Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 EIF4EP5-201ENST00000528228 640 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC010735.1-201ENST00000567305 1026 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC096720.1-201ENST00000604441 183 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC015726.3-201ENST00000624501 418 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 MIR96-201ENST00000362288 78 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 Y_RNA.251-201ENST00000364551 99 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 RNU6-707P-201ENST00000364647 95 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 RNU1-109P-201ENST00000383960 147 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 FO393419.3-201ENST00000428741 282 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC114322.1-201ENST00000506771 926 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 C1GALT1P2-201ENST00000510813 1104 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 IGHVIII-5-1-201ENST00000523059 99 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 POLR2KP1-201ENST00000553226 168 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC005156.1-201ENST00000613371 573 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 RNU6-532P-201ENST00000384318 107 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC009238.1-201ENST00000442165 424 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC009237.6-201ENST00000446969 424 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC087190.1-201ENST00000484462 480 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AL391813.2-201ENST00000609113 322 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 SNHG22-203ENST00000617833 660 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 AC018755.4-201ENST00000619715 454 ntBASIC0.61□□□□□ -2.31
SYNE1Q8NF91 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC0.61□□□□□ -2.31
SYNE1Q8NF91 ZNF37BP-203ENST00000452306 1352 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 RNU6-167P-201ENST00000384292 106 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 DNAJC19P6-201ENST00000401853 280 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 TRIM60P8Y-201ENST00000436338 762 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC004263.1-201ENST00000479327 332 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MTCO3P35-201ENST00000485582 781 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC111193.1-201ENST00000504097 155 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MIR514B-201ENST00000516774 80 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MTND2P26-201ENST00000528255 1029 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MTND4LP24-201ENST00000572277 291 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC009220.3-201ENST00000604318 586 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 VN1R74P-201ENST00000613259 503 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 HMGB1P31-201ENST00000437242 427 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 TOMM22P6-201ENST00000465035 409 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC090515.1-201ENST00000465295 476 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC107393.1-201ENST00000512403 346 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MIR4474-201ENST00000579189 78 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AP001029.3-201ENST00000588063 596 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC011468.4-201ENST00000603942 409 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MTCYBP12-201ENST00000440559 1134 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AL031659.1-201ENST00000447075 539 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC084768.2-201ENST00000622736 221 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AL359740.1-201ENST00000624340 592 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC016717.2-201ENST00000609089 5141 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MTCO1P4-201ENST00000520516 1409 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 RNU6-185P-201ENST00000384421 107 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 RNU6-342P-201ENST00000384521 104 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 SNORA1.3-201ENST00000384676 136 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AL445685.2-201ENST00000422551 342 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MTCO3P17-201ENST00000443775 513 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 ARL5AP2-201ENST00000444698 533 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 OR7L1P-201ENST00000456181 380 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 SNORD13-201ENST00000459299 104 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MRPL42P6-201ENST00000486397 371 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC121758.2-201ENST00000553271 193 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC005730.3-201ENST00000583067 366 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 7SK.7-201ENST00000603504 247 ntBASIC0.6□□□□□ -2.31
SYNE1Q8NF91 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.6□□□□□ -2.31
SYNE1Q8NF91 MIR4278-201ENST00000636094 69 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms