Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC244205.2-202ENST00000635781 342 ntBASIC3.32□□□□□ -1.88
LINC00346Q8IVM7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC00346Q8IVM7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC00346Q8IVM7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC00346Q8IVM7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC00346Q8IVM7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC00346Q8IVM7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AL137003.2-201ENST00000606924 2538 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 RNU4-21P-201ENST00000362802 126 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 FCF1P10-201ENST00000407590 479 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 USP9YP13-201ENST00000417797 480 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC090960.1-201ENST00000421072 306 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC244035.1-201ENST00000430042 390 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 NEK4P1-201ENST00000433383 879 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC092641.1-201ENST00000440229 772 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 COX6CP2-201ENST00000444980 225 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 COX6CP12-201ENST00000446748 202 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 TPT1P12-201ENST00000448968 492 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC092798.1-201ENST00000458542 409 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 SNORD97-201ENST00000459187 142 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 RN7SL330P-201ENST00000469709 307 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC023598.1-201ENST00000472521 361 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 RN7SL323P-201ENST00000494712 295 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 PCBP2P3-201ENST00000509726 843 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AF131216.2-201ENST00000512316 564 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 TTC39CP1-201ENST00000512513 755 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AP002748.2-201ENST00000528671 348 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC008011.1-201ENST00000545989 227 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 CLIC4P2-201ENST00000601934 717 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC105129.3-201ENST00000605455 485 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 SNORA62.6-201ENST00000606322 83 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 MIR6875-201ENST00000617506 72 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 ZYXP1-201ENST00000617638 118 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 FP236240.3-201ENST00000623061 327 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC110801.1-201ENST00000623590 212 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AP003122.6-201ENST00000623831 495 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC025048.6-202ENST00000627667 438 ntBASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC00346Q8IVM7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 SNORA14A-201ENST00000364773 135 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 RNU6-213P-201ENST00000384051 104 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 RNU6-1035P-201ENST00000384477 107 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 RNU6-628P-201ENST00000410675 107 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 RNU2-8P-201ENST00000410727 190 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 ZNF90P2-204ENST00000419323 1075 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 CYCSP46-201ENST00000423569 204 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 RSL24D1P6-201ENST00000426934 401 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 MTND1P26-201ENST00000440488 538 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 BNIP3P2-201ENST00000441221 577 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 TRIM60P18-201ENST00000441518 828 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 PIGFP3-201ENST00000441918 722 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC099563.1-201ENST00000456086 418 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC087588.1-201ENST00000462203 316 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 SCARNA14-201ENST00000516903 136 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 RN7SKP258-201ENST00000517151 304 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AP003467.2-201ENST00000520175 319 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC053481.4-201ENST00000583164 216 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AP001981.2-201ENST00000603241 418 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC239868.4-201ENST00000608318 671 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC092628.2-201ENST00000622492 339 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms