Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SUMO2P20-201ENST00000520803 283 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 AP005435.4-201ENST00000529514 284 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC107918.3-201ENST00000533272 382 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC124068.1-201ENST00000563131 678 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC023575.1-201ENST00000580510 358 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC064801.1-201ENST00000612025 407 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 MIR3653-201ENST00000625572 110 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 MTND4LP32-201ENST00000636111 270 ntBASIC4.13□□□□□ -1.75
VRK3Q8IV63 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK3Q8IV63 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK3Q8IV63 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.13□□□□□ -1.75
VRK3Q8IV63 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VRK3Q8IV63 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC006971.1-201ENST00000407916 4486 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 MTCO1P12-201ENST00000414273 1543 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VRK3Q8IV63 Y_RNA.22-201ENST00000362492 102 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 Y_RNA.367-201ENST00000365544 101 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 RNU6-639P-201ENST00000384074 107 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 RNY4P36-201ENST00000391116 96 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AL024474.1-201ENST00000404655 591 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VRK3Q8IV63 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VRK3Q8IV63 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 AL590233.1-201ENST00000430017 456 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VRK3Q8IV63 HLA-N-201ENST00000437516 135 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC108734.1-201ENST00000439549 399 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC069285.2-201ENST00000440210 275 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 AL590639.1-201ENST00000456484 337 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 MTND5P22-201ENST00000458380 195 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC006512.1-201ENST00000468816 291 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 RPS26P28-201ENST00000470806 348 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC105137.1-201ENST00000484355 562 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 PPBPP1-201ENST00000510807 373 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AP000907.2-201ENST00000530827 353 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 DNAJC8P1-201ENST00000554535 372 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 MIR3939-201ENST00000582614 106 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 MIR4424-201ENST00000585257 86 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AP001029.3-201ENST00000588063 596 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC006006.1-201ENST00000603082 144 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC016925.2-201ENST00000605108 242 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC080078.3-201ENST00000605407 463 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 uc_338.15-201ENST00000615470 191 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC084781.2-201ENST00000615568 161 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AL445567.2-201ENST00000618935 498 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 CYP3A51P-201ENST00000633513 256 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC055839.1-201ENST00000634467 498 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VRK3Q8IV63 AC018529.3-201ENST00000624212 2254 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 XPOTP1-201ENST00000443317 2398 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 LARP1BP1-201ENST00000506036 1359 ntBASIC4.12□□□□□ -1.75
VRK3Q8IV63 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VRK3Q8IV63 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.12□□□□□ -1.75
VRK3Q8IV63 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC015813.6-201ENST00000624409 5808 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 MIR383-201ENST00000362257 73 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 Y_RNA.197-201ENST00000364004 102 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 SNORA22B-201ENST00000383876 138 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 MIR454-201ENST00000390180 115 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 MIR708-201ENST00000390708 88 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VRK3Q8IV63 RNU2-39P-201ENST00000410604 198 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 RNU4-14P-201ENST00000410858 122 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AL160275.2-201ENST00000412010 394 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 GSTM3P2-201ENST00000412746 530 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC012065.2-201ENST00000421295 375 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC005517.2-201ENST00000424673 553 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 AC096632.1-201ENST00000427395 310 ntBASIC4.11□□□□□ -1.75
VRK3Q8IV63 RPL36P19-201ENST00000430744 301 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms