Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 RNU6-840P-201ENST00000517275 65 ntBASIC5.75□□□□□ -1.49
RNF135Q8IUD6 IGLV3-24-201ENST00000517477 197 ntBASIC5.75□□□□□ -1.49
RNF135Q8IUD6 AC040926.1-201ENST00000530195 238 ntBASIC5.75□□□□□ -1.49
RNF135Q8IUD6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 RN7SL652P-201ENST00000577769 300 ntBASIC5.75□□□□□ -1.49
RNF135Q8IUD6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 AC234771.5-201ENST00000600161 514 ntBASIC5.75□□□□□ -1.49
RNF135Q8IUD6 AC069307.1-201ENST00000602820 447 ntBASIC5.75□□□□□ -1.49
RNF135Q8IUD6 MTND4LP5-201ENST00000605152 292 ntBASIC5.75□□□□□ -1.49
RNF135Q8IUD6 HMGB1P50-201ENST00000605814 607 ntBASIC5.75□□□□□ -1.49
RNF135Q8IUD6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF135Q8IUD6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AC144833.1-201ENST00000567953 4089 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 EOGT-210ENST00000615922 1931 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 Y_RNA.276-201ENST00000364732 109 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 RNU6-1093P-201ENST00000391194 107 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AL138885.1-201ENST00000405921 675 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 HSPE1P8-201ENST00000406997 288 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 RNU6-174P-201ENST00000410406 106 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 RNU6-712P-201ENST00000410558 100 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AC093655.2-201ENST00000425735 631 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AL353997.1-201ENST00000432936 108 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AC011753.3-201ENST00000443436 406 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 RPL7P5-201ENST00000471472 736 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 RN7SL591P-201ENST00000496150 292 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 MRPS33P2-201ENST00000507850 322 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AC136777.2-201ENST00000522979 358 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 HMGB1P40-201ENST00000525121 540 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AC107918.3-201ENST00000533272 382 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 HSPE1P20-201ENST00000538133 289 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 RPL23AP87-202ENST00000573039 466 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AL160281.1-201ENST00000605307 311 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AL031601.2-202ENST00000622650 282 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 AC074101.1-201ENST00000637861 241 ntBASIC5.74□□□□□ -1.49
RNF135Q8IUD6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF135Q8IUD6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC114774.1-201ENST00000507410 1770 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 RNU4-42P-201ENST00000364738 142 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 Y_RNA.478-201ENST00000384358 107 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 SNORD73A-201ENST00000386062 65 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AL133388.1-201ENST00000404509 287 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 RNU6-1156P-201ENST00000410365 100 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AL590139.1-201ENST00000416267 400 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 HMGB1P27-201ENST00000431429 603 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 DAP3P1-201ENST00000441522 278 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AL590399.6-201ENST00000446396 307 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 snoU13.20-201ENST00000459180 104 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 IGLV2-34-201ENST00000490007 283 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms