Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AP002826.1-201ENST00000608835 315 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.41□□□□□ -1.86
LDB1Q86U70 AC004908.2-201ENST00000609090 574 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LDB1Q86U70 AL138713.1-201ENST00000624026 2130 ntBASIC3.41□□□□□ -1.86
LDB1Q86U70 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB1Q86U70 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.41□□□□□ -1.86
LDB1Q86U70 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LDB1Q86U70 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LDB1Q86U70 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LDB1Q86U70 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LDB1Q86U70 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
LDB1Q86U70 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.4□□□□□ -1.86
LDB1Q86U70 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.4□□□□□ -1.86
LDB1Q86U70 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB1Q86U70 RNU4-21P-201ENST00000362802 126 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 RNU6-223P-201ENST00000362830 107 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 RNU5E-5P-201ENST00000365379 116 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
LDB1Q86U70 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LDB1Q86U70 EI24P2-201ENST00000397776 1076 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB1Q86U70 AC078974.1-201ENST00000411597 223 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB1Q86U70 RPL21P32-201ENST00000419877 477 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 CYCSP46-201ENST00000423569 204 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 RPL22P17-201ENST00000438729 315 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 MTND2P4-201ENST00000445034 1004 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LDB1Q86U70 RPL21P23-201ENST00000446654 460 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 AL592447.1-201ENST00000447592 540 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 AC135721.1-201ENST00000497954 479 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB1Q86U70 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB1Q86U70 SNORA31.22-201ENST00000517204 135 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 AC026403.1-201ENST00000518938 295 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB1Q86U70 MIR5697-201ENST00000578045 78 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 COX6CP3-201ENST00000580869 223 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 AC105224.1-201ENST00000587055 421 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 AC022146.1-201ENST00000595307 847 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 AC010620.1-201ENST00000601088 1102 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 AC012065.4-201ENST00000602445 679 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 OR2AS2P-201ENST00000606902 342 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 AC093838.1-201ENST00000613014 469 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 MIR8058-201ENST00000615737 89 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB1Q86U70 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB1Q86U70 AL392088.2-201ENST00000637607 285 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
LDB1Q86U70 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LDB1Q86U70 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LDB1Q86U70 ELL2P3-201ENST00000457883 1602 ntBASIC3.4□□□□□ -1.87
LDB1Q86U70 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
LDB1Q86U70 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LDB1Q86U70 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDB1Q86U70 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDB1Q86U70 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB1Q86U70 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB1Q86U70 MIR19A-201ENST00000384878 82 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 SNORD115.1-201ENST00000391109 76 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 RPL7P25-201ENST00000404151 721 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 CCNG1P1-201ENST00000406783 885 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 RPS29P4-201ENST00000414733 161 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AL356968.1-201ENST00000416622 474 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 BX842559.1-201ENST00000419615 532 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB1Q86U70 RPL27AP8-201ENST00000424277 446 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AP000907.1-201ENST00000428428 510 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AC244035.1-201ENST00000430042 390 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB1Q86U70 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC098826.1-201ENST00000433943 471 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AC129850.1-201ENST00000436203 508 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 FTH1P1-201ENST00000437933 532 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB1Q86U70 MTND2P22-201ENST00000444325 1033 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AL590365.1-201ENST00000450788 243 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 RPS4XP2-201ENST00000458402 793 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AC004801.2-202ENST00000463559 283 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC110768.1-201ENST00000509222 400 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC109464.2-201ENST00000510242 943 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB1Q86U70 IGKV2-26-201ENST00000518305 343 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.39□□□□□ -1.87
LDB1Q86U70 ERHP1-201ENST00000523006 310 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AL356057.1-201ENST00000533798 831 ntBASIC3.39□□□□□ -1.87
LDB1Q86U70 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDB1Q86U70 AC011602.1-201ENST00000546484 331 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms