Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 RNU6-545P-201ENST00000362681 104 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 RNU1-32P-201ENST00000363937 159 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 RNA5SP187-201ENST00000384400 119 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC096920.1-201ENST00000423991 241 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AL162389.1-201ENST00000449233 177 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC009963.2-201ENST00000453431 138 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC010631.1-201ENST00000474150 156 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 RN7SL481P-201ENST00000477764 299 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 RPS4XP20-201ENST00000505751 772 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 RNA5SP373-201ENST00000517271 95 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 SULT1C2P2-201ENST00000562517 294 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC012669.1-201ENST00000603209 283 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC007566.2-201ENST00000603642 413 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AL591516.1-201ENST00000611326 274 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 MIR7703-201ENST00000620784 77 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 AC083837.1-201ENST00000565297 2994 ntBASIC5.99□□□□□ -1.45
SH3RF1Q7Z6J0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 AC004656.1-201ENST00000568479 4951 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 Y_RNA.48-201ENST00000362710 103 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 RNU6-48P-201ENST00000384161 107 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 RPS23P10-201ENST00000416185 486 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 NDUFB1P2-201ENST00000449477 176 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 CEACAMP6-201ENST00000452007 574 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 AC067942.3-201ENST00000512025 362 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 RNU4-71P-201ENST00000516258 113 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 RNU6-390P-201ENST00000516259 103 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 Y_RNA.687-201ENST00000516558 91 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 AC103783.1-201ENST00000520506 373 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 CBX3P8-201ENST00000532412 525 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 AL162431.4-201ENST00000604674 411 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SH3RF1Q7Z6J0 ADAM5-202ENST00000399789 1942 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 Y_RNA.274-201ENST00000364714 101 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 RNA5SP87-201ENST00000384155 118 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 Y_RNA.539-201ENST00000384635 107 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 RNU2-25P-201ENST00000411041 191 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AL590139.1-201ENST00000416267 400 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 EIF1P2-201ENST00000428233 350 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AC016712.1-201ENST00000431088 378 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 CEACAMP1-201ENST00000434624 1035 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 EEF1A1P1-201ENST00000447052 739 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 CR383656.1-201ENST00000484916 377 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 OR7H2P-201ENST00000513483 306 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AP002770.2-201ENST00000543613 532 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AC234771.5-201ENST00000600161 514 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 RNU6-85P-201ENST00000605989 107 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AC006023.2-201ENST00000609916 167 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AC093799.2-201ENST00000610062 578 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AL161616.1-201ENST00000611867 286 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AC091905.4-201ENST00000623432 202 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms