Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 NFU1P2-201ENST00000448700 469 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC010655.1-201ENST00000449336 292 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC069499.1-201ENST00000489433 509 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC007458.1-201ENST00000542812 373 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC092470.1-201ENST00000546187 132 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AL845331.3-202ENST00000562856 261 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC107954.1-201ENST00000565906 727 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 MIR4458-201ENST00000578872 75 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 OR10AB1P-201ENST00000609613 938 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC017083.3-201ENST00000609955 700 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 BX664608.1-201ENST00000610519 487 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AL596245.1-201ENST00000618994 362 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AL732618.1-201ENST00000623251 301 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 MTCO1P12-201ENST00000414273 1543 ntBASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3BQ7Z3V4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AL139811.1-201ENST00000424779 2299 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 RNU6-780P-201ENST00000391030 104 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 RPL23AP32-201ENST00000395315 459 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 CCDC58P2-201ENST00000417131 366 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AL109913.1-201ENST00000421173 514 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC133104.1-201ENST00000429100 218 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AL159987.2-201ENST00000432754 307 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 SDCBPP1-201ENST00000440192 890 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 HMGB1P15-201ENST00000453854 435 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AP1S2P1-201ENST00000457344 379 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AP003034.1-201ENST00000534621 422 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AL512310.1-201ENST00000548639 172 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC067852.4-201ENST00000590314 478 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 SRGNP1-201ENST00000603392 451 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC011451.2-201ENST00000604303 598 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC007363.1-201ENST00000604736 620 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AL365503.1-201ENST00000605247 905 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC009268.2-201ENST00000621925 457 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC010149.2-201ENST00000637608 315 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AC090229.1-201ENST00000590983 1609 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 AL365440.1-201ENST00000436135 2167 ntBASIC4.53□□□□□ -1.68
UBE3BQ7Z3V4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 MTND5P33-201ENST00000571250 1450 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 RNA5SP322-201ENST00000363617 119 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 RNU6-114P-201ENST00000384704 105 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 AL356421.1-201ENST00000403255 413 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 RN7SKP285-201ENST00000410137 318 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 RPL31P35-201ENST00000431058 377 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 EZH2P1-201ENST00000431167 291 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 AC002486.1-201ENST00000435098 391 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 MTCYBP45-201ENST00000435243 565 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 AF228730.2-201ENST00000438784 848 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 PRSS3P4-201ENST00000453323 162 ntBASIC4.52□□□□□ -1.69
UBE3BQ7Z3V4 RPS20P32-201ENST00000456044 356 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms