Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC1.92□□□□□ -2.1
SCXQ7RTU7 AC006116.7-201ENST00000590141 756 ntBASIC1.92□□□□□ -2.1
SCXQ7RTU7 AC023043.3-201ENST00000593113 385 ntBASIC1.92□□□□□ -2.1
SCXQ7RTU7 TUG1_1.1-201ENST00000610654 145 ntBASIC1.92□□□□□ -2.1
SCXQ7RTU7 OR5H6-203ENST00000642105 978 ntBASIC1.92□□□□□ -2.1
SCXQ7RTU7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SCXQ7RTU7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.92□□□□□ -2.1
SCXQ7RTU7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.92□□□□□ -2.1
SCXQ7RTU7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SCXQ7RTU7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCXQ7RTU7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCXQ7RTU7 Z99496.1-201ENST00000469424 1477 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 FRG1BP-201ENST00000278882 761 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 ANKRD36P1-201ENST00000344424 659 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 RNA5SP393-201ENST00000363423 117 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 RNU1-105P-201ENST00000363470 161 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 RNU6-461P-201ENST00000364195 107 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 MIR767-201ENST00000390228 109 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AL513475.1-201ENST00000406602 315 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 OR2AS1P-201ENST00000427827 319 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 MTCO1P3-201ENST00000429327 192 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AL590233.1-201ENST00000430017 456 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AL139132.1-201ENST00000431587 344 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 SEPT7P5-201ENST00000434048 306 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 THAP5P1-201ENST00000439089 262 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC093155.1-201ENST00000440164 826 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 RPL39P40-201ENST00000445481 146 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 MTCYBP3-201ENST00000445588 1137 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 RNU6-420P-201ENST00000458780 107 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 RPS15AP17-201ENST00000470598 390 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC117440.1-201ENST00000474107 571 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC090453.1-201ENST00000495560 436 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC008837.1-201ENST00000511513 412 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 MRPS36P2-201ENST00000512569 299 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC091826.1-201ENST00000514065 313 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 RNA5SP76-201ENST00000516277 87 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCXQ7RTU7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC138915.2-201ENST00000569776 97 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 MIR5194-201ENST00000582634 120 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 DUXAP11-201ENST00000603858 526 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC006023.1-201ENST00000603944 259 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC120053.1-201ENST00000607706 736 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC069234.5-201ENST00000611056 416 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC084824.5-201ENST00000612009 413 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC005332.6-201ENST00000613178 446 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC090132.2-201ENST00000615881 347 ntBASIC1.91□□□□□ -2.1
SCXQ7RTU7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCXQ7RTU7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SCXQ7RTU7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCXQ7RTU7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCXQ7RTU7 CR848007.1-201ENST00000442354 1699 ntBASIC1.9□□□□□ -2.1
SCXQ7RTU7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SCXQ7RTU7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.9□□□□□ -2.11
SCXQ7RTU7 SNRPEP3-201ENST00000338402 276 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 MIR325-201ENST00000385260 98 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 AL450338.1-201ENST00000407987 512 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.9□□□□□ -2.11
SCXQ7RTU7 TAAR7P-201ENST00000436141 242 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.9□□□□□ -2.11
SCXQ7RTU7 PTGES3P1-201ENST00000439531 483 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.9□□□□□ -2.11
SCXQ7RTU7 MTCYBP42-201ENST00000444653 1130 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.9□□□□□ -2.11
SCXQ7RTU7 OFD1P3Y-201ENST00000453312 783 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 AC087588.1-201ENST00000462203 316 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 AC008571.1-201ENST00000467232 300 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 AP000852.1-201ENST00000472460 573 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.9□□□□□ -2.11
SCXQ7RTU7 AC083906.5-201ENST00000503722 328 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 PRELID3BP6-201ENST00000503839 571 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
SCXQ7RTU7 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 AC008716.1-201ENST00000511084 513 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 TTC39CP1-201ENST00000512513 755 ntBASIC1.9□□□□□ -2.11
SCXQ7RTU7 RN7SKP43-201ENST00000516173 320 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms