Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
UBR3Q6ZT12 RPS15AP7-201ENST00000439294 405 ntBASIC1.89□□□□□ -2.11
UBR3Q6ZT12 HMGN1P7-201ENST00000491722 313 ntBASIC1.89□□□□□ -2.11
UBR3Q6ZT12 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.89□□□□□ -2.11
UBR3Q6ZT12 ATP5EP1-201ENST00000510257 156 ntBASIC1.89□□□□□ -2.11
UBR3Q6ZT12 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.89□□□□□ -2.11
UBR3Q6ZT12 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.89□□□□□ -2.11
UBR3Q6ZT12 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.89□□□□□ -2.11
UBR3Q6ZT12 RNA5SP108-201ENST00000605921 117 ntBASIC1.89□□□□□ -2.11
UBR3Q6ZT12 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.89□□□□□ -2.11
UBR3Q6ZT12 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.89□□□□□ -2.11
UBR3Q6ZT12 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
UBR3Q6ZT12 NUP58P1-201ENST00000502546 1738 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 RPL21P75-201ENST00000396599 483 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 RPL21P28-201ENST00000401418 483 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AL592114.1-201ENST00000403842 483 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AL590084.1-201ENST00000407885 387 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 RPL31P2-201ENST00000413849 377 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.88□□□□□ -2.11
UBR3Q6ZT12 RFESDP1-201ENST00000422350 461 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AL354695.1-201ENST00000427935 228 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 HMGB1P45-201ENST00000435986 653 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AC017099.1-201ENST00000448261 1028 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AC011979.1-201ENST00000472300 483 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 RPL21P93-201ENST00000480465 489 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AC233702.1-201ENST00000482905 502 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AC093591.1-201ENST00000491435 481 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 RPL21P16-201ENST00000495531 483 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.88□□□□□ -2.11
UBR3Q6ZT12 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
UBR3Q6ZT12 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
UBR3Q6ZT12 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AL365400.1-201ENST00000431854 640 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AC244505.5-201ENST00000443639 207 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.88□□□□□ -2.11
UBR3Q6ZT12 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.88□□□□□ -2.11
UBR3Q6ZT12 RPS29P20-201ENST00000489592 171 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.88□□□□□ -2.11
UBR3Q6ZT12 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
UBR3Q6ZT12 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.88□□□□□ -2.11
UBR3Q6ZT12 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.87□□□□□ -2.11
UBR3Q6ZT12 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBR3Q6ZT12 SNRPEP2-201ENST00000397592 279 ntBASIC1.87□□□□□ -2.11
UBR3Q6ZT12 MTCYBP45-201ENST00000435243 565 ntBASIC1.87□□□□□ -2.11
UBR3Q6ZT12 RPS15AP17-201ENST00000470598 390 ntBASIC1.87□□□□□ -2.11
UBR3Q6ZT12 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.87□□□□□ -2.11
UBR3Q6ZT12 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.87□□□□□ -2.11
UBR3Q6ZT12 AC091057.2-201ENST00000602594 792 ntBASIC1.87□□□□□ -2.11
UBR3Q6ZT12 AC006023.2-201ENST00000609916 167 ntBASIC1.87□□□□□ -2.11
UBR3Q6ZT12 MIR6779-201ENST00000617283 64 ntBASIC1.87□□□□□ -2.11
UBR3Q6ZT12 STMN1P1-201ENST00000617809 440 ntBASIC1.87□□□□□ -2.11
UBR3Q6ZT12 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
UBR3Q6ZT12 AC008568.2-201ENST00000623862 2313 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 SNORA67.6-201ENST00000391093 99 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 CCNB2P1-201ENST00000399411 1150 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 RPL23AP47-201ENST00000408017 460 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AC010625.1-201ENST00000511296 403 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AP002748.2-201ENST00000528671 348 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AC024614.2-201ENST00000577584 372 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AC080078.3-201ENST00000605407 463 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 DUXAP9-208ENST00000622815 614 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AL513185.2-201ENST00000425543 193 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 MIR3660-201ENST00000584845 100 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 YWHAQP7-201ENST00000603536 658 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AC022709.1-201ENST00000615967 87 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
UBR3Q6ZT12 AL157700.1-201ENST00000561973 1432 ntBASIC1.86□□□□□ -2.11
UBR3Q6ZT12 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UBR3Q6ZT12 RNU1-93P-201ENST00000364704 169 ntBASIC1.85□□□□□ -2.11
UBR3Q6ZT12 PRELID3BP11-201ENST00000414230 479 ntBASIC1.85□□□□□ -2.11
UBR3Q6ZT12 HSPE1P1-201ENST00000421494 318 ntBASIC1.85□□□□□ -2.11
UBR3Q6ZT12 RPS6P14-201ENST00000425165 719 ntBASIC1.85□□□□□ -2.11
UBR3Q6ZT12 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.85□□□□□ -2.11
UBR3Q6ZT12 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.85□□□□□ -2.11
UBR3Q6ZT12 CALM1P2-201ENST00000452941 448 ntBASIC1.85□□□□□ -2.11
UBR3Q6ZT12 AF131216.2-201ENST00000512316 564 ntBASIC1.85□□□□□ -2.11
UBR3Q6ZT12 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
UBR3Q6ZT12 OR4G1P-201ENST00000588632 938 ntBASIC1.85□□□□□ -2.11
UBR3Q6ZT12 AC121761.2-201ENST00000617300 689 ntBASIC1.85□□□□□ -2.11
UBR3Q6ZT12 RNA5SP393-201ENST00000363423 117 ntBASIC1.84□□□□□ -2.11
UBR3Q6ZT12 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.84□□□□□ -2.11
UBR3Q6ZT12 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.84□□□□□ -2.11
UBR3Q6ZT12 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.84□□□□□ -2.11
UBR3Q6ZT12 RPS29P29-201ENST00000456396 171 ntBASIC1.84□□□□□ -2.11
UBR3Q6ZT12 HMGN1P8-201ENST00000463578 288 ntBASIC1.84□□□□□ -2.11
UBR3Q6ZT12 RPL21P104-201ENST00000464143 478 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms