Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PDZRN4Q6ZMN7 MTCO1P9-201ENST00000505577 1534 ntBASIC5.33□□□□□ -1.56
PDZRN4Q6ZMN7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 RN7SKP44-201ENST00000363602 316 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 SNORA33.2-201ENST00000365413 134 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 RNY4P36-201ENST00000391116 96 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 U3.29-201ENST00000391296 212 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AL136372.1-201ENST00000403060 228 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 RPL35AP22-201ENST00000436855 335 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC010733.1-201ENST00000451515 401 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 RPL36AP13-201ENST00000457490 317 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 RNU6-1208P-201ENST00000459588 107 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC027575.1-201ENST00000481064 460 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 CEACAMP10-202ENST00000495431 496 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 Y_RNA.654-201ENST00000497848 106 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 HMGB3P15-201ENST00000507326 574 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC006499.6-201ENST00000511169 607 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 IGKV1-32-201ENST00000519290 311 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC090151.1-201ENST00000520784 730 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 IFITM8P-201ENST00000522529 394 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 MTND4P7-201ENST00000523876 130 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC012339.2-201ENST00000523996 453 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC209154.1-201ENST00000582156 337 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AL391358.1-201ENST00000605342 190 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AL080274.1-201ENST00000605565 220 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 uc_338.34-201ENST00000617467 174 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC007546.1-201ENST00000619452 559 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 MIR4727-201ENST00000622232 55 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 U6.114-201ENST00000636407 96 ntBASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PDZRN4Q6ZMN7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AC011266.1-201ENST00000624119 3569 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 Y_RNA.339-201ENST00000365325 102 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 Y_RNA.395-201ENST00000383945 109 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 SNORD51-201ENST00000384320 80 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 SNORD116-29-201ENST00000384516 83 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 MTCYBP4-201ENST00000401524 249 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AL592114.1-201ENST00000403842 483 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 RPL23AP48-201ENST00000406913 488 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AL359265.2-201ENST00000434367 631 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 TPT1P13-201ENST00000449760 499 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 RPS29P33-201ENST00000456717 146 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 RNU7-66P-201ENST00000459469 62 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 VN1R17P-201ENST00000472048 1090 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 TRBVA-201ENST00000498804 316 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 OR5B10P-201ENST00000532869 642 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AC006270.2-201ENST00000578523 652 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AC020910.3-201ENST00000603701 874 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AC010680.4-201ENST00000605334 543 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AC080078.3-201ENST00000605407 463 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.31□□□□□ -1.56
PDZRN4Q6ZMN7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms