Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL139247.1-201ENST00000422768 325 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 RN7SKP83-201ENST00000516512 178 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 RNU6-714P-201ENST00000516963 103 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 ZNF705CP-201ENST00000530515 889 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 AC099489.2-201ENST00000574976 260 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 AC087499.8-201ENST00000578406 226 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 MIR3167-201ENST00000579623 85 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 MIR3118-1-201ENST00000581787 76 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 NF1P5-201ENST00000588287 448 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 AC012507.3-201ENST00000603556 477 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 AC007621.1-201ENST00000604544 437 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 AL354798.1-201ENST00000622505 329 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 AC093648.1-201ENST00000623546 606 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 AC112487.2-201ENST00000637950 304 ntBASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.7□□□□□ -1.82
ZNF549Q6P9A3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 ZNF680P1-201ENST00000436625 1469 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 SNORD56.2-201ENST00000363242 71 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RNY3P3-201ENST00000363816 102 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RNU1-85P-201ENST00000364127 164 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RNU6-359P-201ENST00000365466 108 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 MT-TD-201ENST00000387419 68 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RNA5SP424-201ENST00000390988 115 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC068050.1-201ENST00000394891 380 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AL031679.1-201ENST00000400616 525 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RPS4XP8-201ENST00000402039 771 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 SDCBPP3-201ENST00000419629 891 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 SNRPEP10-201ENST00000420249 274 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 OR51AB1P-201ENST00000429046 620 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 GTF2IP20-201ENST00000431663 360 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC006480.1-201ENST00000449887 378 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC022034.3-201ENST00000471393 478 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RPL36AP51-201ENST00000487216 318 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RNA5SP164-201ENST00000516533 110 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RNU6-835P-201ENST00000516974 104 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC008011.1-201ENST00000545989 227 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 CYCSP30-201ENST00000546447 172 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 HNRNPCP4-201ENST00000571636 900 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AL353997.4-201ENST00000586196 166 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AL020997.2-201ENST00000602607 184 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AL162413.1-201ENST00000603198 110 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RNU1-30P-201ENST00000606575 163 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 MIR98-201ENST00000606724 119 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 BX664608.1-201ENST00000610519 487 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC009233.1-201ENST00000616477 371 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC006504.8-201ENST00000621046 635 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AL136221.1-201ENST00000621449 509 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 AC024614.3-201ENST00000637860 256 ntBASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ZNF549Q6P9A3 XPOTP1-201ENST00000443317 2398 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 CEP170P1-201ENST00000502249 4587 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 RNA5SP515-201ENST00000364570 118 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 Y_RNA.381-201ENST00000365666 102 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 RPL7P60-201ENST00000397636 735 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 BTBD10P2-201ENST00000404779 676 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 MIR1193-201ENST00000408109 78 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 RPL7P54-201ENST00000438336 674 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 CALM1P1-201ENST00000442082 433 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 FAM172BP-201ENST00000487497 1089 ntBASIC3.68□□□□□ -1.82
ZNF549Q6P9A3 AC093853.1-201ENST00000515689 483 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms