Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AP000542.2-201ENST00000623199 6179 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 RNU6-128P-201ENST00000383976 107 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 SNORA36C-201ENST00000384289 132 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 ATG3P1-201ENST00000419507 911 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC008264.1-201ENST00000447612 367 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 RPL30P15-201ENST00000457129 321 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 RN7SL443P-201ENST00000464331 290 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC087884.1-201ENST00000469738 328 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 COX6B1P5-201ENST00000509843 249 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC104136.1-201ENST00000512969 394 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC022634.1-201ENST00000520765 532 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC022360.1-201ENST00000521058 340 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 EDDM3DP-201ENST00000554692 434 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AC105254.2-201ENST00000603636 436 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AL031320.1-201ENST00000604177 357 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 AL591926.8-201ENST00000616876 211 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 uc_338.22-201ENST00000622722 187 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 MTND5P10-201ENST00000603719 1809 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 A2MP1-204ENST00000566278 4130 ntBASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.92□□□□□ -1.62
SNAP47Q5SQN1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AL672167.1-204ENST00000641875 3017 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 RNA5SP443-201ENST00000363083 132 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 RNU6-593P-201ENST00000364716 112 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 RNA5SP428-201ENST00000365129 132 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AL078599.1-201ENST00000402075 293 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AL590704.1-201ENST00000402856 794 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 RPS4XP7-201ENST00000406274 780 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 RPL31P12-201ENST00000422587 358 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 HMGB1P27-201ENST00000431429 603 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC112498.1-201ENST00000444401 332 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 MTCO3P10-201ENST00000455912 772 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 RN7SL319P-201ENST00000480656 221 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC098976.1-201ENST00000513014 541 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC105031.1-201ENST00000518550 476 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC090151.1-201ENST00000520784 730 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 RPL23AP87-202ENST00000573039 466 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC069061.3-201ENST00000582254 823 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC019193.3-201ENST00000609144 554 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AL157817.1-201ENST00000614264 790 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC010378.1-201ENST00000619270 362 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC087385.3-201ENST00000620477 187 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 AC090337.1-201ENST00000579651 2074 ntBASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.91□□□□□ -1.62
SNAP47Q5SQN1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms