Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 HMGB1P14-201ENST00000557424 591 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC027176.1-201ENST00000560204 514 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC234778.2-201ENST00000566241 354 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC011260.1-201ENST00000578420 472 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 LARP7P3-201ENST00000579888 337 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AP003485.2-201ENST00000623636 610 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC011477.1-204ENST00000623416 1325 ntBASIC1.84□□□□□ -2.12
CCDC58Q4VC31 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CCDC58Q4VC31 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CCDC58Q4VC31 SNORA80A-201ENST00000363922 136 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 RNU6-821P-201ENST00000390995 107 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 CYCSP45-201ENST00000402289 315 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 SNORD56-201ENST00000413522 71 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC58Q4VC31 AL356867.1-201ENST00000429623 299 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 CYCSP32-201ENST00000440548 321 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 CBWD4P-201ENST00000445695 655 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC58Q4VC31 RPL23AP42-201ENST00000471152 471 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 AC072039.1-201ENST00000477611 581 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 AC021087.2-201ENST00000504656 1203 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC58Q4VC31 AC118465.1-201ENST00000513820 1271 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC58Q4VC31 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC58Q4VC31 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC58Q4VC31 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC58Q4VC31 AC040174.2-201ENST00000602701 465 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 AC109809.1-201ENST00000619665 545 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 MTND2P41-201ENST00000637599 773 ntBASIC1.83□□□□□ -2.12
CCDC58Q4VC31 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 GSTA9P-201ENST00000406231 611 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 XKRYP1-201ENST00000423438 492 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AL451062.2-201ENST00000427515 271 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 XKRYP2-201ENST00000432915 492 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 FGF7P5-201ENST00000441829 291 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AL627224.1-201ENST00000448334 444 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AC022447.3-201ENST00000506865 495 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 FABP5P6-201ENST00000510588 409 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 CASP1P1-201ENST00000526345 212 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AC135628.1-201ENST00000568867 534 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AC025165.5-201ENST00000602802 578 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AC007938.3-201ENST00000604965 623 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AC239803.2-201ENST00000610161 430 ntBASIC1.82□□□□□ -2.12
CCDC58Q4VC31 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC58Q4VC31 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC016716.1-201ENST00000265882 708 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 RPS4XP8-201ENST00000402039 771 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC096664.2-201ENST00000411843 406 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 FCF1P2-201ENST00000415284 583 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC58Q4VC31 PTP4A1P7-201ENST00000423476 514 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC58Q4VC31 Z99127.2-201ENST00000441426 334 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC58Q4VC31 MTND4LP3-201ENST00000468320 276 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC004924.1-201ENST00000480160 781 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC023141.11-201ENST00000508864 202 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 SNORD116-30-201ENST00000516468 85 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AP001646.1-201ENST00000527936 915 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AL049838.1-201ENST00000563647 981 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 EIF5A2P1-201ENST00000564027 460 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC010615.3-201ENST00000597319 394 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AL513477.2-201ENST00000607858 568 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC004908.2-201ENST00000609090 574 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC005296.1-201ENST00000616145 209 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AL353748.2-201ENST00000622148 471 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC006386.2-201ENST00000624491 75 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AC012005.1-201ENST00000624575 75 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 AP001002.2-201ENST00000625137 386 ntBASIC1.81□□□□□ -2.12
CCDC58Q4VC31 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CCDC58Q4VC31 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CCDC58Q4VC31 TPTE2P4-201ENST00000258589 1605 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms