Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC116618.1-201ENST00000634617 774 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.61□□□□□ -1.99
RFX4Q33E94 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.61□□□□□ -1.99
RFX4Q33E94 AC092593.1-201ENST00000515413 1815 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 MTND5P1-201ENST00000445440 1375 ntBASIC2.61□□□□□ -1.99
RFX4Q33E94 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.61□□□□□ -1.99
RFX4Q33E94 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RFX4Q33E94 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX4Q33E94 RNU1-109P-201ENST00000383960 147 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 RNU6-1122P-201ENST00000384449 107 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 RNA5SP171-201ENST00000391071 115 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 HMGB1P17-201ENST00000403495 628 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AC019178.2-201ENST00000423595 505 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.6□□□□□ -1.99
RFX4Q33E94 MTCO1P39-201ENST00000426148 480 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 ATP5F1P1-201ENST00000433775 569 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 USP9YP24-201ENST00000434374 697 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 MTCO2P20-201ENST00000437339 673 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX4Q33E94 USP9YP17-201ENST00000444617 696 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX4Q33E94 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX4Q33E94 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX4Q33E94 RPL21P134-201ENST00000453468 483 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX4Q33E94 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 RNU7-136P-201ENST00000458819 69 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AP001025.2-201ENST00000490908 477 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AC006445.1-201ENST00000491925 405 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX4Q33E94 AC117522.3-201ENST00000507974 584 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFX4Q33E94 AC079395.1-201ENST00000510981 262 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 TBCAP3-201ENST00000512475 312 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX4Q33E94 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.6□□□□□ -1.99
RFX4Q33E94 NBEAP1-201ENST00000554452 979 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.6□□□□□ -1.99
RFX4Q33E94 AC053481.3-201ENST00000577881 843 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.6□□□□□ -1.99
RFX4Q33E94 BNIP3P40-201ENST00000596017 556 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 VN1R78P-201ENST00000597393 564 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.6□□□□□ -1.99
RFX4Q33E94 AC024220.1-201ENST00000603675 484 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AP001330.4-201ENST00000604350 154 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 NUTF2P8-201ENST00000604593 363 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AL133507.1-201ENST00000605269 557 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFX4Q33E94 AC006386.1-201ENST00000619436 415 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AL356585.4-201ENST00000623078 1229 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 AL078595.3-201ENST00000623815 1166 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.6□□□□□ -1.99
RFX4Q33E94 CUL1P1-201ENST00000509510 2425 ntBASIC2.6□□□□□ -1.99
RFX4Q33E94 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.59□□□□□ -1.99
RFX4Q33E94 AC096644.4-201ENST00000563417 2912 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AC011460.1-201ENST00000636268 1834 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RFX4Q33E94 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 RNU4-92P-201ENST00000363783 136 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 DEFA7P-201ENST00000382676 285 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 RNU6-851P-201ENST00000384565 107 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 MIR135A2-201ENST00000384854 100 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 RNA5SP252-201ENST00000391131 119 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 SNORA11-201ENST00000408789 128 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RFX4Q33E94 RAP1BP1-201ENST00000412709 553 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AL592310.1-201ENST00000414330 671 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 TPMTP2-201ENST00000414372 726 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.59□□□□□ -1.99
RFX4Q33E94 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.59□□□□□ -1.99
RFX4Q33E94 TIMM9P2-201ENST00000419324 266 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.59□□□□□ -1.99
RFX4Q33E94 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.59□□□□□ -1.99
RFX4Q33E94 UBBP3-201ENST00000445497 241 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AL590664.1-201ENST00000448065 339 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.59□□□□□ -1.99
RFX4Q33E94 DUXAP8-207ENST00000456786 622 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AL031183.1-201ENST00000457667 207 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 USP9YP25-201ENST00000457708 443 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.59□□□□□ -1.99
RFX4Q33E94 AC114981.1-201ENST00000503897 678 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.59□□□□□ -1.99
RFX4Q33E94 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.59□□□□□ -1.99
RFX4Q33E94 SCARNA13-201ENST00000516672 275 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.59□□□□□ -1.99
RFX4Q33E94 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.59□□□□□ -1.99
RFX4Q33E94 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.59□□□□□ -1.99
RFX4Q33E94 FAM60BP-201ENST00000578364 658 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 OR4K7P-201ENST00000580232 945 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.59□□□□□ -1.99
RFX4Q33E94 AL356575.1-201ENST00000603008 283 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 SRGNP1-201ENST00000603392 451 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 BNIP3P11-201ENST00000603878 563 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AL390208.1-201ENST00000605885 644 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AC080013.3-201ENST00000606839 578 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 DUXAP10-204ENST00000612052 616 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AL392048.1-201ENST00000613946 534 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 AL138880.2-201ENST00000616214 239 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms