Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SSX1Q16384 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.18□□□□□ -2.06
SSX1Q16384 RNU5B-4P-201ENST00000363508 111 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 RNA5SP139-201ENST00000364340 117 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 ANAPC10P1-201ENST00000395991 556 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 UBA52P6-201ENST00000399822 382 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.18□□□□□ -2.06
SSX1Q16384 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SSX1Q16384 AL590233.1-201ENST00000430017 456 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.18□□□□□ -2.06
SSX1Q16384 SEPT7P5-201ENST00000434048 306 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 RPL26P6-201ENST00000440913 438 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.18□□□□□ -2.06
SSX1Q16384 AL121871.1-201ENST00000443413 436 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AL592447.1-201ENST00000447592 540 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 RPL39P6-201ENST00000448289 150 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AC005297.2-201ENST00000450430 606 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 PNPLA4P1-201ENST00000458328 305 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AC026410.2-201ENST00000460281 156 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AL672167.3-201ENST00000465951 960 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AL049714.1-201ENST00000466686 347 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SSX1Q16384 NAMPTP2-201ENST00000505629 1115 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 CDC42P4-201ENST00000510507 563 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.18□□□□□ -2.06
SSX1Q16384 RNU6-798P-201ENST00000516912 103 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 SNORA31.21-201ENST00000517180 77 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AP003355.1-201ENST00000518956 587 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SSX1Q16384 MTCO3P15-201ENST00000526563 574 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 OR4R1P-201ENST00000529879 463 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.18□□□□□ -2.06
SSX1Q16384 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.18□□□□□ -2.06
SSX1Q16384 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.18□□□□□ -2.06
SSX1Q16384 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.18□□□□□ -2.06
SSX1Q16384 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.18□□□□□ -2.06
SSX1Q16384 MIR5195-201ENST00000583555 115 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 TUG1_1.1-201ENST00000610654 145 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 MIR6798-201ENST00000612887 67 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AC008759.3-201ENST00000613300 508 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 U4.3-201ENST00000621047 82 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AC244100.1-202ENST00000621554 382 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AC011330.2-201ENST00000621680 635 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AC090772.4-201ENST00000623599 362 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.18□□□□□ -2.06
SSX1Q16384 AC110079.1-202ENST00000635213 138 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 AC006927.2-201ENST00000639256 389 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SSX1Q16384 AC073346.2-201ENST00000624724 2058 ntBASIC2.18□□□□□ -2.06
SSX1Q16384 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SSX1Q16384 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SSX1Q16384 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 Y_RNA.25-201ENST00000362528 102 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 SNORA41-201ENST00000384675 132 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SSX1Q16384 SNORD65.1-201ENST00000390889 71 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 SNORA48.7-201ENST00000391302 135 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 SNRPEP2-201ENST00000397592 279 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AL450338.1-201ENST00000407987 512 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AL592310.1-201ENST00000414330 671 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 BTF3P8-201ENST00000414577 526 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.17□□□□□ -2.06
SSX1Q16384 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.17□□□□□ -2.06
SSX1Q16384 SUMO1P4-201ENST00000429430 302 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.17□□□□□ -2.06
SSX1Q16384 AC087499.2-201ENST00000432861 149 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.17□□□□□ -2.06
SSX1Q16384 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.17□□□□□ -2.06
SSX1Q16384 MTCYBP11-201ENST00000447254 1109 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.17□□□□□ -2.06
SSX1Q16384 RSL24D1P3-201ENST00000449255 495 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 RPS15AP17-201ENST00000470598 390 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SSX1Q16384 AC023424.2-201ENST00000493479 777 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 RPL30P5-201ENST00000494923 336 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 MTND2P31-201ENST00000512602 616 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.17□□□□□ -2.06
SSX1Q16384 MTCO3P27-201ENST00000514397 196 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 OR4R2P-201ENST00000530815 597 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 ACTR3BP3-201ENST00000565577 979 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.17□□□□□ -2.06
SSX1Q16384 MIR4429-201ENST00000580105 73 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.17□□□□□ -2.06
SSX1Q16384 AC008739.2-201ENST00000597006 317 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.17□□□□□ -2.06
SSX1Q16384 AC079089.3-201ENST00000603094 673 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 DUXAP11-201ENST00000603858 526 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AL137843.1-201ENST00000605078 385 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AC107308.1-201ENST00000615897 301 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AC253576.2-201ENST00000618815 580 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.17□□□□□ -2.06
SSX1Q16384 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.17□□□□□ -2.06
SSX1Q16384 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SSX1Q16384 AC093536.2-201ENST00000565257 1406 ntBASIC2.17□□□□□ -2.06
SSX1Q16384 AC010680.1-201ENST00000590024 3590 ntBASIC2.16□□□□□ -2.06
SSX1Q16384 AC069528.2-201ENST00000624849 1991 ntBASIC2.16□□□□□ -2.06
SSX1Q16384 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms