Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 HNRNPDP2-201ENST00000406475 478 ntBASIC1.44□□□□□ -2.18
HMGN3Q15651 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGN3Q15651 AC093155.1-201ENST00000440164 826 ntBASIC1.44□□□□□ -2.18
HMGN3Q15651 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGN3Q15651 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGN3Q15651 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGN3Q15651 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGN3Q15651 AC104581.2-201ENST00000572227 430 ntBASIC1.44□□□□□ -2.18
HMGN3Q15651 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.44□□□□□ -2.18
HMGN3Q15651 AC103710.2-201ENST00000609912 942 ntBASIC1.44□□□□□ -2.18
HMGN3Q15651 U73479.1-201ENST00000618062 168 ntBASIC1.44□□□□□ -2.18
HMGN3Q15651 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGN3Q15651 FAM157B-203ENST00000639350 358 ntBASIC1.44□□□□□ -2.18
HMGN3Q15651 AC011477.1-204ENST00000623416 1325 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AL359715.4-201ENST00000606629 1436 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
HMGN3Q15651 AC068050.1-201ENST00000394891 380 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 CYCSP45-201ENST00000402289 315 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN3Q15651 RPL23AP39-201ENST00000415533 405 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 NUP35P2-201ENST00000416748 943 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AL645568.3-201ENST00000433683 316 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGN3Q15651 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.43□□□□□ -2.18
HMGN3Q15651 AL360221.1-201ENST00000445989 335 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGN3Q15651 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN3Q15651 CABYRP1-201ENST00000465493 1045 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AC079203.1-201ENST00000487972 404 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 EIF4EP3-201ENST00000498782 656 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN3Q15651 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMGN3Q15651 AC118465.1-201ENST00000513820 1271 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 RNU7-193P-201ENST00000516723 65 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGN3Q15651 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN3Q15651 MTND2P26-201ENST00000528255 1029 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN3Q15651 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGN3Q15651 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGN3Q15651 UBE2L4-201ENST00000587688 464 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AL392112.1-201ENST00000605115 829 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AC009570.1-201ENST00000609599 745 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 MIR6076-201ENST00000617521 113 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 AC018755.4-201ENST00000619715 454 ntBASIC1.43□□□□□ -2.18
HMGN3Q15651 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
HMGN3Q15651 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.43□□□□□ -2.18
HMGN3Q15651 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.43□□□□□ -2.18
HMGN3Q15651 AC131280.1-202ENST00000624067 4211 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMGN3Q15651 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMGN3Q15651 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.42□□□□□ -2.18
HMGN3Q15651 RPL7P27-201ENST00000403775 720 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 RNU4-26P-201ENST00000410270 107 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 RNU2-21P-201ENST00000410368 188 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 ARL2BPP3-201ENST00000421226 480 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 XKRYP1-201ENST00000423438 492 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 AC007560.1-201ENST00000426912 237 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 XKRYP2-201ENST00000432915 492 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 DNAJC19P8-201ENST00000452887 259 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 SYPL1P1-201ENST00000473622 768 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 RPS29P21-201ENST00000496272 170 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMGN3Q15651 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.42□□□□□ -2.18
HMGN3Q15651 BTF3P12-201ENST00000519620 469 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGN3Q15651 AL354943.1-201ENST00000572103 781 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.42□□□□□ -2.18
HMGN3Q15651 AC022662.1-201ENST00000580252 331 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.42□□□□□ -2.18
HMGN3Q15651 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.42□□□□□ -2.18
HMGN3Q15651 AC015849.6-201ENST00000605454 474 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGN3Q15651 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HMGN3Q15651 AC095031.1-201ENST00000623685 672 ntBASIC1.42□□□□□ -2.18
HMGN3Q15651 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGN3Q15651 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HMGN3Q15651 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMGN3Q15651 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMGN3Q15651 MIR583-201ENST00000384846 75 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 RPS4XP3-201ENST00000398541 413 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 MTCYBP24-201ENST00000420387 1106 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 AL512661.1-201ENST00000434586 1253 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 UBE2V1P13-201ENST00000436983 439 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HMGN3Q15651 RPL7P54-201ENST00000438336 674 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 CDC42P1-201ENST00000456658 548 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 snoU13.4-201ENST00000458916 104 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGN3Q15651 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
HMGN3Q15651 AC022880.1-201ENST00000534017 973 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.41□□□□□ -2.18
HMGN3Q15651 BNIP3P19-201ENST00000605397 577 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGN3Q15651 MIR6864-201ENST00000617935 70 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 ZNF37BP-203ENST00000452306 1352 ntBASIC1.41□□□□□ -2.18
HMGN3Q15651 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms