Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 AC007998.5-201ENST00000622938 237 ntBASIC3.38□□□□□ -1.87
SMC1AQ14683 AC073348.1-201ENST00000623002 331 ntBASIC3.38□□□□□ -1.87
SMC1AQ14683 MIR1322-201ENST00000638013 71 ntBASIC3.38□□□□□ -1.87
SMC1AQ14683 MIR622-201ENST00000638396 96 ntBASIC3.38□□□□□ -1.87
SMC1AQ14683 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMC1AQ14683 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.38□□□□□ -1.87
SMC1AQ14683 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMC1AQ14683 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SMC1AQ14683 SNORA71.1-201ENST00000364523 117 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 snoZ40.1-201ENST00000364540 72 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AL450338.1-201ENST00000407987 512 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 RN7SKP220-201ENST00000410611 288 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 MTCO2P23-201ENST00000425216 680 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC1AQ14683 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMC1AQ14683 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC1AQ14683 RPL26P6-201ENST00000440913 438 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC1AQ14683 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC1AQ14683 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.37□□□□□ -1.87
SMC1AQ14683 AP004217.1-201ENST00000480579 346 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 UBE2V1P12-201ENST00000503954 474 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
SMC1AQ14683 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.37□□□□□ -1.87
SMC1AQ14683 RNA5SP76-201ENST00000516277 87 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AC009812.2-201ENST00000517657 457 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.37□□□□□ -1.87
SMC1AQ14683 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.37□□□□□ -1.87
SMC1AQ14683 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMC1AQ14683 AC020895.1-201ENST00000595362 272 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AC091057.2-201ENST00000602594 792 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AC006023.1-201ENST00000603944 259 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AL157392.4-201ENST00000609756 345 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.37□□□□□ -1.87
SMC1AQ14683 AC110079.1-202ENST00000635213 138 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 MIR6733-201ENST00000635723 61 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.37□□□□□ -1.87
SMC1AQ14683 AC108206.1-201ENST00000570186 4159 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AC000403.1-201ENST00000613696 3585 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 AC099654.7-201ENST00000635788 2127 ntBASIC3.37□□□□□ -1.87
SMC1AQ14683 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SMC1AQ14683 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMC1AQ14683 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.36□□□□□ -1.87
SMC1AQ14683 RNU5A-1-201ENST00000362698 116 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 RNU6-198P-201ENST00000384258 104 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AL031121.1-201ENST00000406553 254 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.36□□□□□ -1.87
SMC1AQ14683 RNU2-42P-201ENST00000410697 113 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 CCDC58P2-201ENST00000417131 366 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 Z75741.2-201ENST00000417272 1167 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.36□□□□□ -1.87
SMC1AQ14683 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.36□□□□□ -1.87
SMC1AQ14683 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.36□□□□□ -1.87
SMC1AQ14683 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.36□□□□□ -1.87
SMC1AQ14683 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 GTF2IP7-202ENST00000436677 309 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 Z96811.1-201ENST00000445880 108 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SMC1AQ14683 AC234775.1-201ENST00000454247 670 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AC092798.1-201ENST00000458542 409 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 RPL21P131-201ENST00000497298 483 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 TMEM251P1-201ENST00000503717 318 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.36□□□□□ -1.87
SMC1AQ14683 AC009901.1-201ENST00000506703 541 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AC026801.2-201ENST00000515352 425 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AC022861.1-201ENST00000522981 663 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.36□□□□□ -1.87
SMC1AQ14683 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMC1AQ14683 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.36□□□□□ -1.87
SMC1AQ14683 ACTR3BP3-201ENST00000565577 979 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.36□□□□□ -1.87
SMC1AQ14683 MIR3912-201ENST00000577566 105 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.36□□□□□ -1.87
SMC1AQ14683 VN1R83P-201ENST00000595685 445 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AC008739.2-201ENST00000597006 317 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 RPL23AP78-201ENST00000599928 470 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AL390838.2-201ENST00000602394 274 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AL160237.3-201ENST00000604114 1013 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AC016597.2-201ENST00000613256 341 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 uc_338.25-201ENST00000613756 156 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AC025588.4-201ENST00000615802 908 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 AC022960.3-201ENST00000619794 441 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 OR1S1-201ENST00000624470 978 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 LRRC77P-213ENST00000637727 880 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 FAM35BP-202ENST00000497389 3337 ntBASIC3.36□□□□□ -1.87
SMC1AQ14683 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMC1AQ14683 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SMC1AQ14683 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMC1AQ14683 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SMC1AQ14683 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.35□□□□□ -1.87
SMC1AQ14683 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SMC1AQ14683 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SMC1AQ14683 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
SMC1AQ14683 MIR181B1-201ENST00000385240 110 ntBASIC3.35□□□□□ -1.87
SMC1AQ14683 SNORA40.2-201ENST00000390847 128 ntBASIC3.35□□□□□ -1.87
SMC1AQ14683 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.35□□□□□ -1.87
SMC1AQ14683 AL139281.1-201ENST00000422120 335 ntBASIC3.35□□□□□ -1.87
SMC1AQ14683 AC004854.1-201ENST00000440356 349 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms