Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.39□□□□□ -2.19
TFF3Q07654 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.39□□□□□ -2.19
TFF3Q07654 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.39□□□□□ -2.19
TFF3Q07654 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 AC009090.3-201ENST00000616553 565 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.39□□□□□ -2.19
TFF3Q07654 AP002907.1-201ENST00000606361 1430 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 AC026241.1-201ENST00000517873 2142 ntBASIC1.39□□□□□ -2.19
TFF3Q07654 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TFF3Q07654 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.38□□□□□ -2.19
TFF3Q07654 POLHP1-201ENST00000411806 470 ntBASIC1.38□□□□□ -2.19
TFF3Q07654 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.38□□□□□ -2.19
TFF3Q07654 USP9YP10-201ENST00000454868 628 ntBASIC1.38□□□□□ -2.19
TFF3Q07654 SNRPGP9-201ENST00000456025 225 ntBASIC1.38□□□□□ -2.19
TFF3Q07654 SNRPFP4-201ENST00000456366 242 ntBASIC1.38□□□□□ -2.19
TFF3Q07654 AMD1P1-201ENST00000457220 922 ntBASIC1.38□□□□□ -2.19
TFF3Q07654 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.38□□□□□ -2.19
TFF3Q07654 BZW1P2-201ENST00000473537 826 ntBASIC1.38□□□□□ -2.19
TFF3Q07654 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.38□□□□□ -2.19
TFF3Q07654 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.38□□□□□ -2.19
TFF3Q07654 SMARCE1P4-201ENST00000523647 241 ntBASIC1.38□□□□□ -2.19
TFF3Q07654 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.38□□□□□ -2.19
TFF3Q07654 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.38□□□□□ -2.19
TFF3Q07654 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.38□□□□□ -2.19
TFF3Q07654 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
TFF3Q07654 AC106028.5-201ENST00000610332 395 ntBASIC1.38□□□□□ -2.19
TFF3Q07654 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.38□□□□□ -2.19
TFF3Q07654 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TFF3Q07654 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
TFF3Q07654 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
TFF3Q07654 AC135776.4-201ENST00000624300 1904 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 MIR518E-201ENST00000385252 88 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 RNU6-174P-201ENST00000410406 106 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 RN7SKP101-201ENST00000411376 320 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 PRELID3BP11-201ENST00000414230 479 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.37□□□□□ -2.19
TFF3Q07654 RPL36AP21-201ENST00000490372 323 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 RPS15AP36-201ENST00000492022 382 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.37□□□□□ -2.19
TFF3Q07654 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.37□□□□□ -2.19
TFF3Q07654 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.37□□□□□ -2.19
TFF3Q07654 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.37□□□□□ -2.19
TFF3Q07654 AC084851.1-201ENST00000529105 249 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 ARL2BPP2-201ENST00000550907 489 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.37□□□□□ -2.19
TFF3Q07654 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.37□□□□□ -2.19
TFF3Q07654 MTCO1P40-201ENST00000574371 625 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.37□□□□□ -2.19
TFF3Q07654 AC012360.2-201ENST00000609349 391 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 AL031601.2-202ENST00000622650 282 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 AC116618.1-201ENST00000634617 774 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 BX649567.1-201ENST00000642071 1134 ntBASIC1.37□□□□□ -2.19
TFF3Q07654 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TFF3Q07654 SNORA7.1-201ENST00000363750 139 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 RNU6-356P-201ENST00000384140 107 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
TFF3Q07654 MIR1323-201ENST00000408090 73 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 AC092447.6-201ENST00000414578 210 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 ZNF90P2-204ENST00000419323 1075 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 DNAJC19P4-201ENST00000440115 345 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.36□□□□□ -2.19
TFF3Q07654 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.36□□□□□ -2.19
TFF3Q07654 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.36□□□□□ -2.19
TFF3Q07654 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.36□□□□□ -2.19
TFF3Q07654 RNA5SP445-201ENST00000515889 115 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 RN7SKP82-201ENST00000516786 223 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.36□□□□□ -2.19
TFF3Q07654 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.36□□□□□ -2.19
TFF3Q07654 AL161670.1-201ENST00000554348 137 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.36□□□□□ -2.19
TFF3Q07654 AC015720.1-201ENST00000565251 277 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 SEPT7P9-203ENST00000604116 343 ntBASIC1.36□□□□□ -2.19
TFF3Q07654 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TFF3Q07654 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.36□□□□□ -2.19
TFF3Q07654 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.36□□□□□ -2.19
TFF3Q07654 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TFF3Q07654 ZNF734P-201ENST00000419494 1534 ntBASIC1.35□□□□□ -2.19
TFF3Q07654 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
TFF3Q07654 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TFF3Q07654 AL357078.2-201ENST00000416486 427 ntBASIC1.35□□□□□ -2.19
TFF3Q07654 AL513185.2-201ENST00000425543 193 ntBASIC1.35□□□□□ -2.19
TFF3Q07654 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.35□□□□□ -2.19
TFF3Q07654 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.35□□□□□ -2.19
TFF3Q07654 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.35□□□□□ -2.19
TFF3Q07654 AL137159.1-201ENST00000452808 512 ntBASIC1.35□□□□□ -2.19
TFF3Q07654 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.35□□□□□ -2.19
TFF3Q07654 AC093281.2-201ENST00000510153 597 ntBASIC1.35□□□□□ -2.19
TFF3Q07654 RNA5SP490-201ENST00000517141 136 ntBASIC1.35□□□□□ -2.19
TFF3Q07654 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.35□□□□□ -2.19
TFF3Q07654 AC022790.1-201ENST00000522872 204 ntBASIC1.35□□□□□ -2.19
TFF3Q07654 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.35□□□□□ -2.19
TFF3Q07654 OR4K8P-201ENST00000578842 1048 ntBASIC1.35□□□□□ -2.19
TFF3Q07654 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.35□□□□□ -2.19
TFF3Q07654 RMST_6.1-201ENST00000611980 203 ntBASIC1.35□□□□□ -2.19
TFF3Q07654 AC005539.1-201ENST00000443768 1479 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms