Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX4Q06945 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX4Q06945 AC074029.4-201ENST00000624796 1859 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX4Q06945 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX4Q06945 XIAPP3-201ENST00000312918 795 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SOX4Q06945 Y_RNA.152-201ENST00000363578 100 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 RNU1-32P-201ENST00000363937 159 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 MIR141-201ENST00000384975 95 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 RNU2-23P-201ENST00000410545 195 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX4Q06945 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX4Q06945 Z99755.1-201ENST00000414048 380 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX4Q06945 HMGN2P27-201ENST00000427352 270 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 ARL5AP4-201ENST00000430731 512 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX4Q06945 AC079168.2-201ENST00000453977 416 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 RNU7-167P-201ENST00000459160 62 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 AC090686.1-201ENST00000481577 749 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 ENPP7P9-201ENST00000514456 627 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 RNA5SP384-201ENST00000516615 116 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 RN7SKP40-201ENST00000517211 242 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX4Q06945 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX4Q06945 AL138889.2-201ENST00000603883 242 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 AC016727.2-201ENST00000603988 621 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 MIR8062-201ENST00000621515 85 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX4Q06945 AC011978.2-201ENST00000569835 2054 ntBASIC5.12□□□□□ -1.59
SOX4Q06945 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX4Q06945 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX4Q06945 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
SOX4Q06945 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX4Q06945 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX4Q06945 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SOX4Q06945 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX4Q06945 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SOX4Q06945 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX4Q06945 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SOX4Q06945 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
SOX4Q06945 AC126755.2-208ENST00000327792 462 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 AC138969.1-213ENST00000331436 462 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 Y_RNA.380-201ENST00000365663 111 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 Y_RNA.424-201ENST00000384063 103 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 RNU6-393P-201ENST00000384475 107 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX4Q06945 AL353597.2-202ENST00000434901 373 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 RPL35AP22-201ENST00000436855 335 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX4Q06945 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX4Q06945 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SOX4Q06945 PPIAP3-201ENST00000450588 505 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 SNORD5.1-201ENST00000458800 75 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 AC068781.1-201ENST00000488231 618 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 FTH1P24-201ENST00000503502 462 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 RNU1-6P-201ENST00000516290 144 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 RNU4-77P-201ENST00000516692 156 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 snoU109.6-201ENST00000516831 118 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX4Q06945 AC124068.1-201ENST00000563131 678 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 AC009852.2-201ENST00000567898 485 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.11□□□□□ -1.59
SOX4Q06945 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.11□□□□□ -1.59
SOX4Q06945 NF1P5-201ENST00000588287 448 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 AL021879.1-201ENST00000611756 288 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.11□□□□□ -1.59
SOX4Q06945 AC073136.1-201ENST00000449426 2884 ntBASIC5.11□□□□□ -1.59
SOX4Q06945 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SOX4Q06945 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX4Q06945 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SOX4Q06945 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SOX4Q06945 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX4Q06945 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX4Q06945 AC112198.2-201ENST00000426589 6996 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX4Q06945 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX4Q06945 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX4Q06945 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX4Q06945 Y_RNA.2-201ENST00000362330 96 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 Y_RNA.288-201ENST00000364854 92 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX4Q06945 RNU6-95P-201ENST00000384697 107 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX4Q06945 AC243428.1-201ENST00000421099 264 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX4Q06945 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX4Q06945 USP9YP30-201ENST00000430729 455 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 DYNLT3P2-201ENST00000442517 295 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 OSTCP8-201ENST00000445117 448 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 TPT1P13-201ENST00000449760 499 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX4Q06945 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX4Q06945 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX4Q06945 AC117503.1-201ENST00000472241 394 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 RN7SL860P-201ENST00000473738 223 ntBASIC5.1□□□□□ -1.59
SOX4Q06945 RPS27AP1-201ENST00000475545 471 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms