Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AP005205.1-201ENST00000563503 508 ntBASIC1.43□□□□□ -2.18
SSBP1Q04837 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.43□□□□□ -2.18
SSBP1Q04837 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.43□□□□□ -2.18
SSBP1Q04837 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
SSBP1Q04837 AC020658.4-201ENST00000613987 684 ntBASIC1.43□□□□□ -2.18
SSBP1Q04837 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.43□□□□□ -2.18
SSBP1Q04837 AP001002.2-201ENST00000625137 386 ntBASIC1.43□□□□□ -2.18
SSBP1Q04837 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.43□□□□□ -2.18
SSBP1Q04837 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.43□□□□□ -2.18
SSBP1Q04837 AC046144.1-201ENST00000478559 1853 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AC016716.1-201ENST00000265882 708 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 SNORA70.4-201ENST00000365509 134 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 RNU6-997P-201ENST00000384725 107 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SSBP1Q04837 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AC009237.2-201ENST00000421358 284 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AL445685.2-201ENST00000422551 342 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AC006548.1-201ENST00000427470 102 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AL645568.3-201ENST00000433683 316 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.42□□□□□ -2.18
SSBP1Q04837 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SSBP1Q04837 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.42□□□□□ -2.18
SSBP1Q04837 RNF2P1-201ENST00000442955 1010 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 RPS26P30-201ENST00000443431 335 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.42□□□□□ -2.18
SSBP1Q04837 FABP5P13-201ENST00000452144 328 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 RPS27P26-201ENST00000494583 239 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.42□□□□□ -2.18
SSBP1Q04837 RNA5SP182-201ENST00000516064 82 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AC084851.1-201ENST00000529105 249 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AP002770.2-201ENST00000543613 532 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AL049870.4-201ENST00000555741 486 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AGGF1P5-201ENST00000567900 919 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AC135628.1-201ENST00000568867 534 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.42□□□□□ -2.18
SSBP1Q04837 MIR3117-201ENST00000584034 78 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.42□□□□□ -2.18
SSBP1Q04837 NTAN1P1-201ENST00000603150 646 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AC117490.2-201ENST00000610042 594 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AL590410.1-201ENST00000617925 333 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 AL162373.1-201ENST00000620433 407 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 CR381572.1-201ENST00000625098 102 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.42□□□□□ -2.18
SSBP1Q04837 AL356118.1-201ENST00000635272 1078 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 HSPA8P4-201ENST00000511877 1920 ntBASIC1.42□□□□□ -2.18
SSBP1Q04837 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SSBP1Q04837 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SSBP1Q04837 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
SSBP1Q04837 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SSBP1Q04837 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SSBP1Q04837 AL136360.1-201ENST00000503377 1900 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 RN7SKP226-201ENST00000364912 300 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SSBP1Q04837 RNU6-339P-201ENST00000384310 107 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 DSTNP4-201ENST00000399472 474 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 RNU6-193P-201ENST00000410977 107 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 RPL23AP39-201ENST00000415533 405 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.41□□□□□ -2.18
SSBP1Q04837 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.41□□□□□ -2.18
SSBP1Q04837 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.41□□□□□ -2.18
SSBP1Q04837 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SSBP1Q04837 AL365496.1-201ENST00000426885 215 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 OR4K11P-201ENST00000431829 904 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.41□□□□□ -2.18
SSBP1Q04837 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
SSBP1Q04837 MRPS33P4-201ENST00000434892 317 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 RPL35AP22-201ENST00000436855 335 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 COX6CP12-201ENST00000446748 202 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 PSPHP1-201ENST00000450062 261 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 RPL31P41-201ENST00000477967 372 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 AL135752.1-201ENST00000479477 471 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 AC104687.1-201ENST00000485829 412 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.41□□□□□ -2.18
SSBP1Q04837 GLYCAM1-201ENST00000546596 285 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.41□□□□□ -2.18
SSBP1Q04837 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SSBP1Q04837 AC090312.2-201ENST00000582687 378 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 AC073111.2-201ENST00000605657 1075 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.41□□□□□ -2.18
SSBP1Q04837 AC068944.2-201ENST00000610373 403 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 AC008669.1-201ENST00000565823 2178 ntBASIC1.41□□□□□ -2.18
SSBP1Q04837 AC022336.2-201ENST00000568966 2538 ntBASIC1.4□□□□□ -2.18
SSBP1Q04837 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SSBP1Q04837 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.4□□□□□ -2.19
SSBP1Q04837 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.4□□□□□ -2.19
SSBP1Q04837 SNORA3A-201ENST00000364113 130 ntBASIC1.4□□□□□ -2.19
SSBP1Q04837 MIR9-3-201ENST00000385084 90 ntBASIC1.4□□□□□ -2.19
SSBP1Q04837 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SSBP1Q04837 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.4□□□□□ -2.19
SSBP1Q04837 MIR1303-201ENST00000408625 86 ntBASIC1.4□□□□□ -2.19
SSBP1Q04837 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms