Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 IGLV3-17-201ENST00000519099 244 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.05□□□□□ -2.08
H3F3AP84243 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.05□□□□□ -2.08
H3F3AP84243 AC007938.3-201ENST00000604965 623 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.05□□□□□ -2.08
H3F3AP84243 HMGB1P24-202ENST00000615653 685 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 CR848007.1-201ENST00000442354 1699 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 NUP58P1-201ENST00000502546 1738 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.04□□□□□ -2.08
H3F3AP84243 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.04□□□□□ -2.08
H3F3AP84243 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.04□□□□□ -2.08
H3F3AP84243 AC006020.1-201ENST00000420179 1854 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 ARL2BPP3-201ENST00000421226 480 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 AC009237.2-201ENST00000421358 284 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 MORF4L1P7-201ENST00000426038 703 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 SDAD1P2-201ENST00000441308 2028 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 TRBV26-201ENST00000456572 344 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 snoU109.4-201ENST00000458953 143 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 AC087588.1-201ENST00000462203 316 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.04□□□□□ -2.08
H3F3AP84243 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
H3F3AP84243 RNU6-928P-201ENST00000516876 104 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.04□□□□□ -2.08
H3F3AP84243 AC024224.1-201ENST00000538284 609 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
H3F3AP84243 MIR5694-201ENST00000581190 76 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
H3F3AP84243 AC079395.3-201ENST00000615161 484 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.04□□□□□ -2.08
H3F3AP84243 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
H3F3AP84243 IGHVIII-44-202ENST00000636235 289 ntBASIC2.04□□□□□ -2.08
H3F3AP84243 AC025263.3-201ENST00000622965 1396 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
H3F3AP84243 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
H3F3AP84243 MIRLET7G-201ENST00000362280 84 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.03□□□□□ -2.08
H3F3AP84243 RNU1-52P-201ENST00000384190 164 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 MIR525-201ENST00000384978 85 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 RNU4-53P-201ENST00000410828 140 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 PNRC2P1-201ENST00000423940 420 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.03□□□□□ -2.08
H3F3AP84243 UBE2V1P13-201ENST00000436983 439 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.03□□□□□ -2.08
H3F3AP84243 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.03□□□□□ -2.08
H3F3AP84243 HIGD1AP2-201ENST00000446367 280 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AL031659.1-201ENST00000447075 539 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.03□□□□□ -2.08
H3F3AP84243 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.03□□□□□ -2.08
H3F3AP84243 AL049714.1-201ENST00000466686 347 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC104164.3-201ENST00000467363 1258 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.03□□□□□ -2.08
H3F3AP84243 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.03□□□□□ -2.08
H3F3AP84243 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.03□□□□□ -2.08
H3F3AP84243 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.03□□□□□ -2.08
H3F3AP84243 AC093767.1-201ENST00000504523 156 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.03□□□□□ -2.08
H3F3AP84243 RNA5SP281-201ENST00000516504 135 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.03□□□□□ -2.08
H3F3AP84243 ATP5F1P5-201ENST00000526403 760 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.03□□□□□ -2.08
H3F3AP84243 AP002770.2-201ENST00000543613 532 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 HMGB1P14-201ENST00000557424 591 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 ATP5F1P7-201ENST00000567330 760 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 ISCA1P3-201ENST00000577104 373 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
H3F3AP84243 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.03□□□□□ -2.08
H3F3AP84243 AC079791.1-201ENST00000605356 973 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC097504.2-201ENST00000608088 454 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AP005137.2-201ENST00000609238 400 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.03□□□□□ -2.08
H3F3AP84243 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC073308.1-201ENST00000623696 305 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC090617.9-201ENST00000623751 147 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 AC091925.2-201ENST00000625059 256 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.03□□□□□ -2.08
H3F3AP84243 AC009902.3-201ENST00000606235 2172 ntBASIC2.03□□□□□ -2.08
H3F3AP84243 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
H3F3AP84243 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
H3F3AP84243 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.03□□□□□ -2.09
H3F3AP84243 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.02□□□□□ -2.09
H3F3AP84243 Z99496.1-201ENST00000469424 1477 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 Z82209.1-201ENST00000422141 2135 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 RNU1-51P-201ENST00000365345 176 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 MIR524-201ENST00000385242 87 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 AL358075.3-201ENST00000426289 226 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 MTCO3P30-201ENST00000426425 670 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 Z93242.1-201ENST00000427102 353 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 AC090774.1-201ENST00000435925 246 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.02□□□□□ -2.09
H3F3AP84243 RPL7P36-201ENST00000444633 681 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 RAC1P7-201ENST00000445367 377 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 AC011753.1-201ENST00000451001 220 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 AC092155.2-201ENST00000454675 477 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 AC233279.1-201ENST00000455300 423 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 AL139109.1-201ENST00000455491 297 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 AL135752.1-201ENST00000479477 471 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 AC017037.2-201ENST00000513850 890 ntBASIC2.02□□□□□ -2.09
H3F3AP84243 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms