Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AP003122.3-201ENST00000526316 255 ntBASIC3.03□□□□□ -1.92
IRX3P78415 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
IRX3P78415 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.03□□□□□ -1.92
IRX3P78415 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.03□□□□□ -1.92
IRX3P78415 AC087894.1-201ENST00000538359 518 ntBASIC3.03□□□□□ -1.92
IRX3P78415 AC092451.2-201ENST00000538746 658 ntBASIC3.03□□□□□ -1.92
IRX3P78415 AC007115.1-201ENST00000546853 234 ntBASIC3.03□□□□□ -1.92
IRX3P78415 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.03□□□□□ -1.92
IRX3P78415 NIFKP8-201ENST00000560500 874 ntBASIC3.03□□□□□ -1.92
IRX3P78415 AC103810.1-201ENST00000579873 453 ntBASIC3.03□□□□□ -1.92
IRX3P78415 AC104763.2-201ENST00000604179 382 ntBASIC3.03□□□□□ -1.92
IRX3P78415 CR381572.1-201ENST00000625098 102 ntBASIC3.03□□□□□ -1.92
IRX3P78415 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.03□□□□□ -1.92
IRX3P78415 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.03□□□□□ -1.92
IRX3P78415 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
IRX3P78415 SNORA36C-201ENST00000384289 132 ntBASIC3.02□□□□□ -1.93
IRX3P78415 RNU6-921P-201ENST00000384361 107 ntBASIC3.02□□□□□ -1.93
IRX3P78415 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
IRX3P78415 AL512633.1-201ENST00000399931 655 ntBASIC3.02□□□□□ -1.93
IRX3P78415 RNA5SP56-201ENST00000410277 118 ntBASIC3.02□□□□□ -1.93
IRX3P78415 AL451074.5-201ENST00000415894 435 ntBASIC3.02□□□□□ -1.93
IRX3P78415 AC009963.1-201ENST00000417265 157 ntBASIC3.02□□□□□ -1.93
IRX3P78415 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.02□□□□□ -1.93
IRX3P78415 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.02□□□□□ -1.93
IRX3P78415 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
IRX3P78415 AC234064.1-201ENST00000436312 247 ntBASIC3.02□□□□□ -1.93
IRX3P78415 UBE2D3P1-201ENST00000436669 444 ntBASIC3.02□□□□□ -1.93
IRX3P78415 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.02□□□□□ -1.93
IRX3P78415 RPL23AP16-201ENST00000441715 421 ntBASIC3.02□□□□□ -1.93
IRX3P78415 AC010095.1-201ENST00000443543 144 ntBASIC3.02□□□□□ -1.93
IRX3P78415 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.02□□□□□ -1.93
IRX3P78415 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.02□□□□□ -1.93
IRX3P78415 AC048346.1-201ENST00000510247 144 ntBASIC3.02□□□□□ -1.93
IRX3P78415 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.02□□□□□ -1.93
IRX3P78415 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.02□□□□□ -1.93
IRX3P78415 SNORA9.3-201ENST00000516383 129 ntBASIC3.02□□□□□ -1.93
IRX3P78415 ZNF705CP-201ENST00000530515 889 ntBASIC3.02□□□□□ -1.93
IRX3P78415 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.02□□□□□ -1.93
IRX3P78415 VN1R87P-201ENST00000596706 487 ntBASIC3.02□□□□□ -1.93
IRX3P78415 AC006927.2-201ENST00000639256 389 ntBASIC3.02□□□□□ -1.93
IRX3P78415 BX649567.1-201ENST00000642071 1134 ntBASIC3.02□□□□□ -1.93
IRX3P78415 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
IRX3P78415 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
IRX3P78415 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
IRX3P78415 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.01□□□□□ -1.93
IRX3P78415 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.01□□□□□ -1.93
IRX3P78415 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
IRX3P78415 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
IRX3P78415 SNORA63.3-201ENST00000362682 132 ntBASIC3.01□□□□□ -1.93
IRX3P78415 RNU6-353P-201ENST00000364266 108 ntBASIC3.01□□□□□ -1.93
IRX3P78415 RPL22P22-201ENST00000395439 379 ntBASIC3.01□□□□□ -1.93
IRX3P78415 AL023807.1-201ENST00000407932 359 ntBASIC3.01□□□□□ -1.93
IRX3P78415 RNA5SP181-201ENST00000410246 98 ntBASIC3.01□□□□□ -1.93
IRX3P78415 SFR1P2-201ENST00000421841 730 ntBASIC3.01□□□□□ -1.93
IRX3P78415 MTCO2P1-201ENST00000424648 477 ntBASIC3.01□□□□□ -1.93
IRX3P78415 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.01□□□□□ -1.93
IRX3P78415 MTCYBP15-201ENST00000433123 1127 ntBASIC3.01□□□□□ -1.93
IRX3P78415 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.01□□□□□ -1.93
IRX3P78415 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.01□□□□□ -1.93
IRX3P78415 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.01□□□□□ -1.93
IRX3P78415 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.01□□□□□ -1.93
IRX3P78415 MTCO3P2-201ENST00000457365 171 ntBASIC3.01□□□□□ -1.93
IRX3P78415 RNU7-140P-201ENST00000459546 60 ntBASIC3.01□□□□□ -1.93
IRX3P78415 AC023424.2-201ENST00000493479 777 ntBASIC3.01□□□□□ -1.93
IRX3P78415 OR5H5P-201ENST00000503164 928 ntBASIC3.01□□□□□ -1.93
IRX3P78415 DYNLL1P6-201ENST00000503440 264 ntBASIC3.01□□□□□ -1.93
IRX3P78415 BOLA3P3-201ENST00000505182 232 ntBASIC3.01□□□□□ -1.93
IRX3P78415 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.01□□□□□ -1.93
IRX3P78415 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.01□□□□□ -1.93
IRX3P78415 RNA5SP320-201ENST00000516263 124 ntBASIC3.01□□□□□ -1.93
IRX3P78415 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.01□□□□□ -1.93
IRX3P78415 RNA5SP471-201ENST00000516971 106 ntBASIC3.01□□□□□ -1.93
IRX3P78415 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.01□□□□□ -1.93
IRX3P78415 AP003355.1-201ENST00000518956 587 ntBASIC3.01□□□□□ -1.93
IRX3P78415 AC109329.2-201ENST00000519658 482 ntBASIC3.01□□□□□ -1.93
IRX3P78415 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.01□□□□□ -1.93
IRX3P78415 AC093519.1-201ENST00000566109 298 ntBASIC3.01□□□□□ -1.93
IRX3P78415 TPMTP1-201ENST00000592307 737 ntBASIC3.01□□□□□ -1.93
IRX3P78415 AP001542.2-201ENST00000593141 364 ntBASIC3.01□□□□□ -1.93
IRX3P78415 RPAP2P1-201ENST00000603626 1168 ntBASIC3.01□□□□□ -1.93
IRX3P78415 AC005046.1-201ENST00000608515 625 ntBASIC3.01□□□□□ -1.93
IRX3P78415 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.01□□□□□ -1.93
IRX3P78415 AC098679.5-201ENST00000624394 571 ntBASIC3.01□□□□□ -1.93
IRX3P78415 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
IRX3P78415 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3□□□□□ -1.93
IRX3P78415 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
IRX3P78415 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
IRX3P78415 MIR6073-201ENST00000352083 89 ntBASIC3□□□□□ -1.93
IRX3P78415 SNORA3.2-201ENST00000408221 125 ntBASIC3□□□□□ -1.93
IRX3P78415 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3□□□□□ -1.93
IRX3P78415 AC009237.2-201ENST00000421358 284 ntBASIC3□□□□□ -1.93
IRX3P78415 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3□□□□□ -1.93
IRX3P78415 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3□□□□□ -1.93
IRX3P78415 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3□□□□□ -1.93
IRX3P78415 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3□□□□□ -1.93
IRX3P78415 RPS15AP34-201ENST00000487776 387 ntBASIC3□□□□□ -1.93
IRX3P78415 HMGB3P3-201ENST00000510526 400 ntBASIC3□□□□□ -1.93
IRX3P78415 AC113155.1-201ENST00000511141 769 ntBASIC3□□□□□ -1.93
IRX3P78415 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3□□□□□ -1.93
IRX3P78415 MTCYBP27-201ENST00000555160 670 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms