Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL929288.2-201ENST00000446368 407 ntBASIC2.47□□□□□ -2.01
TPM4P67936 MTND4LP3-201ENST00000468320 276 ntBASIC2.47□□□□□ -2.01
TPM4P67936 AC078857.1-201ENST00000469870 667 ntBASIC2.47□□□□□ -2.01
TPM4P67936 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.47□□□□□ -2.01
TPM4P67936 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.47□□□□□ -2.01
TPM4P67936 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.47□□□□□ -2.01
TPM4P67936 NDUFB4P2-201ENST00000509515 391 ntBASIC2.47□□□□□ -2.01
TPM4P67936 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TPM4P67936 AC109329.2-201ENST00000519658 482 ntBASIC2.47□□□□□ -2.01
TPM4P67936 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.47□□□□□ -2.01
TPM4P67936 ATP5F1P5-201ENST00000526403 760 ntBASIC2.47□□□□□ -2.01
TPM4P67936 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.47□□□□□ -2.01
TPM4P67936 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.47□□□□□ -2.01
TPM4P67936 MIR1254-2-201ENST00000579553 63 ntBASIC2.47□□□□□ -2.01
TPM4P67936 SNORD53-201ENST00000579969 78 ntBASIC2.47□□□□□ -2.01
TPM4P67936 LRRC37A5P-203ENST00000580181 585 ntBASIC2.47□□□□□ -2.01
TPM4P67936 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.47□□□□□ -2.01
TPM4P67936 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.47□□□□□ -2.01
TPM4P67936 AC107294.1-201ENST00000609524 467 ntBASIC2.47□□□□□ -2.01
TPM4P67936 MIR6840-201ENST00000611937 71 ntBASIC2.47□□□□□ -2.01
TPM4P67936 AC245884.12-201ENST00000615364 59 ntBASIC2.47□□□□□ -2.01
TPM4P67936 MIR6817-201ENST00000615588 66 ntBASIC2.47□□□□□ -2.01
TPM4P67936 AL356585.4-201ENST00000623078 1229 ntBASIC2.47□□□□□ -2.01
TPM4P67936 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.47□□□□□ -2.01
TPM4P67936 CU459211.1-201ENST00000635667 749 ntBASIC2.47□□□□□ -2.01
TPM4P67936 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
TPM4P67936 Z99496.1-201ENST00000469424 1477 ntBASIC2.46□□□□□ -2.02
TPM4P67936 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.46□□□□□ -2.02
TPM4P67936 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.46□□□□□ -2.02
TPM4P67936 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
TPM4P67936 OR56A5-201ENST00000340110 738 ntBASIC2.46□□□□□ -2.02
TPM4P67936 SNORD46.1-201ENST00000364139 104 ntBASIC2.46□□□□□ -2.02
TPM4P67936 RNU6-1035P-201ENST00000384477 107 ntBASIC2.46□□□□□ -2.02
TPM4P67936 SNORA48.3-201ENST00000391081 134 ntBASIC2.46□□□□□ -2.02
TPM4P67936 AL122016.1-201ENST00000403365 367 ntBASIC2.46□□□□□ -2.02
TPM4P67936 MIR1290-201ENST00000408735 78 ntBASIC2.46□□□□□ -2.02
TPM4P67936 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.46□□□□□ -2.02
TPM4P67936 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.46□□□□□ -2.02
TPM4P67936 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.46□□□□□ -2.02
TPM4P67936 AC107081.1-201ENST00000414975 361 ntBASIC2.46□□□□□ -2.02
TPM4P67936 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.46□□□□□ -2.02
TPM4P67936 FGF7P5-201ENST00000441829 291 ntBASIC2.46□□□□□ -2.02
TPM4P67936 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.46□□□□□ -2.02
TPM4P67936 IFNA11P-201ENST00000446352 526 ntBASIC2.46□□□□□ -2.02
TPM4P67936 AC147055.4-201ENST00000504399 745 ntBASIC2.46□□□□□ -2.02
TPM4P67936 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.46□□□□□ -2.02
TPM4P67936 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.46□□□□□ -2.02
TPM4P67936 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.46□□□□□ -2.02
TPM4P67936 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.46□□□□□ -2.02
TPM4P67936 AC068135.2-201ENST00000569293 1028 ntBASIC2.46□□□□□ -2.02
TPM4P67936 VN1R92P-201ENST00000598511 928 ntBASIC2.46□□□□□ -2.02
TPM4P67936 AC012468.1-201ENST00000604888 430 ntBASIC2.46□□□□□ -2.02
TPM4P67936 AC046143.2-201ENST00000609789 160 ntBASIC2.46□□□□□ -2.02
TPM4P67936 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
TPM4P67936 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.46□□□□□ -2.02
TPM4P67936 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.46□□□□□ -2.02
TPM4P67936 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.46□□□□□ -2.02
TPM4P67936 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TPM4P67936 AC008432.1-201ENST00000615912 1320 ntBASIC2.45□□□□□ -2.02
TPM4P67936 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TPM4P67936 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TPM4P67936 HSPE1P11-201ENST00000339579 310 ntBASIC2.45□□□□□ -2.02
TPM4P67936 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.45□□□□□ -2.02
TPM4P67936 RNA5SP68-201ENST00000363885 119 ntBASIC2.45□□□□□ -2.02
TPM4P67936 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.45□□□□□ -2.02
TPM4P67936 AL355615.1-201ENST00000406187 641 ntBASIC2.45□□□□□ -2.02
TPM4P67936 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.45□□□□□ -2.02
TPM4P67936 RNA5SP184-201ENST00000411071 108 ntBASIC2.45□□□□□ -2.02
TPM4P67936 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.45□□□□□ -2.02
TPM4P67936 Z75741.2-201ENST00000417272 1167 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AC005005.2-201ENST00000420779 380 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM4P67936 AC024082.2-201ENST00000434771 238 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.45□□□□□ -2.02
TPM4P67936 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM4P67936 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM4P67936 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM4P67936 RNU6-717P-201ENST00000459076 104 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AC025033.1-201ENST00000463883 194 ntBASIC2.45□□□□□ -2.02
TPM4P67936 CABYRP1-201ENST00000465493 1045 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AC107626.1-201ENST00000471084 183 ntBASIC2.45□□□□□ -2.02
TPM4P67936 RNA5SP148-201ENST00000516527 94 ntBASIC2.45□□□□□ -2.02
TPM4P67936 SNORA31.18-201ENST00000517043 134 ntBASIC2.45□□□□□ -2.02
TPM4P67936 RPL7P20-201ENST00000520308 745 ntBASIC2.45□□□□□ -2.02
TPM4P67936 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TPM4P67936 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM4P67936 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM4P67936 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.45□□□□□ -2.02
TPM4P67936 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM4P67936 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM4P67936 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.45□□□□□ -2.02
TPM4P67936 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM4P67936 BPTFP1-201ENST00000579209 492 ntBASIC2.45□□□□□ -2.02
TPM4P67936 MIR3616-201ENST00000584070 92 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.45□□□□□ -2.02
TPM4P67936 AC105224.1-201ENST00000587055 421 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AC005498.1-201ENST00000592125 465 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AP001033.2-201ENST00000609701 1003 ntBASIC2.45□□□□□ -2.02
TPM4P67936 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms