Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
RPL39P62891 PISRT1-201ENST00000626175 531 ntBASIC0.87□□□□□ -2.27
RPL39P62891 WWP1P1-201ENST00000466609 2769 ntBASIC0.87□□□□□ -2.27
RPL39P62891 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
RPL39P62891 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC0.86□□□□□ -2.27
RPL39P62891 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RPL39P62891 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RPL39P62891 TANK-206ENST00000406287 875 ntTSL 5 BASIC0.86□□□□□ -2.27
RPL39P62891 LSM5-206ENST00000409987 504 ntTSL 5 BASIC0.86□□□□□ -2.27
RPL39P62891 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC0.86□□□□□ -2.27
RPL39P62891 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RPL39P62891 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC0.86□□□□□ -2.27
RPL39P62891 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC0.86□□□□□ -2.27
RPL39P62891 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.86□□□□□ -2.27
RPL39P62891 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RPL39P62891 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RPL39P62891 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.86□□□□□ -2.27
RPL39P62891 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.86□□□□□ -2.27
RPL39P62891 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.86□□□□□ -2.27
RPL39P62891 AC067805.1-201ENST00000559344 470 ntBASIC0.86□□□□□ -2.27
RPL39P62891 AC006065.5-201ENST00000623427 349 ntBASIC0.86□□□□□ -2.27
RPL39P62891 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RPL39P62891 AP005901.5-201ENST00000545779 1796 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.85□□□□□ -2.27
RPL39P62891 SNORA3A-201ENST00000364113 130 ntBASIC0.85□□□□□ -2.27
RPL39P62891 MIR150-201ENST00000385048 84 ntBASIC0.85□□□□□ -2.27
RPL39P62891 U8.14-201ENST00000390843 143 ntBASIC0.85□□□□□ -2.27
RPL39P62891 SNORA26.9-201ENST00000391322 122 ntBASIC0.85□□□□□ -2.27
RPL39P62891 CISD1P1-201ENST00000393907 327 ntBASIC0.85□□□□□ -2.27
RPL39P62891 CIR1P3-201ENST00000405137 479 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC0.85□□□□□ -2.27
RPL39P62891 OR51A5P-201ENST00000415429 942 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AC241520.1-201ENST00000422654 1099 ntBASIC0.85□□□□□ -2.27
RPL39P62891 MTATP6P4-201ENST00000427725 675 ntBASIC0.85□□□□□ -2.27
RPL39P62891 ELOCP6-201ENST00000429066 328 ntBASIC0.85□□□□□ -2.27
RPL39P62891 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.85□□□□□ -2.27
RPL39P62891 OR6K5P-201ENST00000447050 945 ntBASIC0.85□□□□□ -2.27
RPL39P62891 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.85□□□□□ -2.27
RPL39P62891 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL39P62891 ELOCP12-201ENST00000458706 328 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AC010683.1-201ENST00000473673 378 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AC055855.1-201ENST00000489563 579 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
RPL39P62891 AC116337.1-201ENST00000509680 687 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.85□□□□□ -2.27
RPL39P62891 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.85□□□□□ -2.27
RPL39P62891 RNU1-92P-201ENST00000517017 135 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.85□□□□□ -2.27
RPL39P62891 ERHP1-201ENST00000523006 310 ntBASIC0.85□□□□□ -2.27
RPL39P62891 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.85□□□□□ -2.27
RPL39P62891 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC0.85□□□□□ -2.27
RPL39P62891 DNAJC19P9-201ENST00000555084 351 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AGGF1P5-201ENST00000567900 919 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AC103987.3-201ENST00000582071 292 ntBASIC0.85□□□□□ -2.27
RPL39P62891 CBX3P2-202ENST00000583365 535 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.85□□□□□ -2.27
RPL39P62891 NTAN1P1-201ENST00000603150 646 ntBASIC0.85□□□□□ -2.27
RPL39P62891 AC108479.2-201ENST00000617314 601 ntBASIC0.85□□□□□ -2.27
RPL39P62891 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
RPL39P62891 AC026634.1-201ENST00000634369 198 ntBASIC0.85□□□□□ -2.27
RPL39P62891 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
RPL39P62891 SNORA7.2-201ENST00000364446 145 ntBASIC0.84□□□□□ -2.27
RPL39P62891 RNA5SP450-201ENST00000411206 102 ntBASIC0.84□□□□□ -2.27
RPL39P62891 RNU2-71P-201ENST00000411395 189 ntBASIC0.84□□□□□ -2.27
RPL39P62891 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC0.84□□□□□ -2.27
RPL39P62891 AC073464.3-201ENST00000422564 712 ntBASIC0.84□□□□□ -2.27
RPL39P62891 RPL21P112-201ENST00000434403 463 ntBASIC0.84□□□□□ -2.27
RPL39P62891 AC118469.1-201ENST00000442943 488 ntBASIC0.84□□□□□ -2.27
RPL39P62891 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC0.84□□□□□ -2.27
RPL39P62891 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.84□□□□□ -2.27
RPL39P62891 RPL23AP42-201ENST00000471152 471 ntBASIC0.84□□□□□ -2.27
RPL39P62891 RPL21P103-201ENST00000479921 488 ntBASIC0.84□□□□□ -2.27
RPL39P62891 AC098862.1-201ENST00000504991 413 ntBASIC0.84□□□□□ -2.27
RPL39P62891 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.84□□□□□ -2.27
RPL39P62891 PTP4A1P6-201ENST00000531034 478 ntBASIC0.84□□□□□ -2.27
RPL39P62891 AC139103.1-201ENST00000534696 1030 ntBASIC0.84□□□□□ -2.27
RPL39P62891 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.84□□□□□ -2.27
RPL39P62891 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC0.84□□□□□ -2.27
RPL39P62891 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.84□□□□□ -2.27
RPL39P62891 AF131215.7-201ENST00000602443 707 ntBASIC0.84□□□□□ -2.27
RPL39P62891 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.84□□□□□ -2.27
RPL39P62891 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.84□□□□□ -2.27
RPL39P62891 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RPL39P62891 ZNF209P-201ENST00000593450 2304 ntBASIC0.83□□□□□ -2.28
RPL39P62891 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
RPL39P62891 SNORA40.6-201ENST00000391153 128 ntBASIC0.83□□□□□ -2.28
RPL39P62891 TRGV5P-201ENST00000419915 354 ntBASIC0.83□□□□□ -2.28
RPL39P62891 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.83□□□□□ -2.28
RPL39P62891 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.83□□□□□ -2.28
RPL39P62891 HMGB1P31-201ENST00000437242 427 ntBASIC0.83□□□□□ -2.28
RPL39P62891 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.83□□□□□ -2.28
RPL39P62891 HMGN2P10-201ENST00000448085 265 ntBASIC0.83□□□□□ -2.28
RPL39P62891 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL39P62891 RPS15AP34-201ENST00000487776 387 ntBASIC0.83□□□□□ -2.28
RPL39P62891 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL39P62891 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC0.83□□□□□ -2.28
RPL39P62891 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL39P62891 RNU1-61P-201ENST00000516107 151 ntBASIC0.83□□□□□ -2.28
RPL39P62891 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC0.83□□□□□ -2.28
RPL39P62891 AL161670.1-201ENST00000554348 137 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms