Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LSM3P62310 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM3P62310 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM3P62310 AC083923.1-201ENST00000523708 376 ntBASIC1.65□□□□□ -2.15
LSM3P62310 MIR4444-1-201ENST00000581696 74 ntBASIC1.65□□□□□ -2.15
LSM3P62310 MIR4444-2-201ENST00000584390 74 ntBASIC1.65□□□□□ -2.15
LSM3P62310 AL356280.1-201ENST00000603614 379 ntBASIC1.65□□□□□ -2.15
LSM3P62310 SUMO2P14-201ENST00000604488 293 ntBASIC1.65□□□□□ -2.15
LSM3P62310 AP005137.2-201ENST00000609238 400 ntBASIC1.65□□□□□ -2.15
LSM3P62310 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM3P62310 AC079395.3-201ENST00000615161 484 ntBASIC1.65□□□□□ -2.15
LSM3P62310 AC025588.4-201ENST00000615802 908 ntBASIC1.65□□□□□ -2.15
LSM3P62310 MIR6873-201ENST00000622788 63 ntBASIC1.65□□□□□ -2.15
LSM3P62310 AP006248.3-201ENST00000623580 594 ntBASIC1.65□□□□□ -2.15
LSM3P62310 MIR7515-201ENST00000637837 67 ntBASIC1.65□□□□□ -2.15
LSM3P62310 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
LSM3P62310 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
LSM3P62310 AC022336.2-201ENST00000568966 2538 ntBASIC1.65□□□□□ -2.15
LSM3P62310 MIR128-1-201ENST00000384921 82 ntBASIC1.64□□□□□ -2.15
LSM3P62310 U3.29-201ENST00000391296 212 ntBASIC1.64□□□□□ -2.15
LSM3P62310 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM3P62310 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.64□□□□□ -2.15
LSM3P62310 NPM1P11-201ENST00000417106 855 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.64□□□□□ -2.15
LSM3P62310 AC099677.1-201ENST00000420575 175 ntBASIC1.64□□□□□ -2.15
LSM3P62310 XKRY2-201ENST00000442362 1093 ntBASIC1.64□□□□□ -2.15
LSM3P62310 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
LSM3P62310 AC068135.1-201ENST00000446164 246 ntBASIC1.64□□□□□ -2.15
LSM3P62310 RPS15AP27-201ENST00000449183 343 ntBASIC1.64□□□□□ -2.15
LSM3P62310 ATG12P2-201ENST00000456830 416 ntBASIC1.64□□□□□ -2.15
LSM3P62310 NAP1L1P3-201ENST00000462291 880 ntBASIC1.64□□□□□ -2.15
LSM3P62310 RPL31P60-201ENST00000478450 367 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM3P62310 HMGB1P47-201ENST00000511281 589 ntBASIC1.64□□□□□ -2.15
LSM3P62310 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.64□□□□□ -2.15
LSM3P62310 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.64□□□□□ -2.15
LSM3P62310 SNORA31.23-201ENST00000517219 133 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AC008676.3-201ENST00000521237 435 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM3P62310 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.64□□□□□ -2.15
LSM3P62310 OR4P1P-201ENST00000530808 1136 ntBASIC1.64□□□□□ -2.15
LSM3P62310 SNRPGP18-201ENST00000553000 214 ntBASIC1.64□□□□□ -2.15
LSM3P62310 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM3P62310 AC023824.2-201ENST00000566185 400 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM3P62310 AC011260.1-201ENST00000578420 472 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AC090312.2-201ENST00000582687 378 ntBASIC1.64□□□□□ -2.15
LSM3P62310 MIR5195-201ENST00000583555 115 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM3P62310 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.64□□□□□ -2.15
LSM3P62310 AL442067.2-201ENST00000614033 363 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AL162233.1-201ENST00000620014 944 ntBASIC1.64□□□□□ -2.15
LSM3P62310 MIR6075-201ENST00000620782 95 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AL109659.3-201ENST00000624985 950 ntBASIC1.64□□□□□ -2.15
LSM3P62310 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.64□□□□□ -2.15
LSM3P62310 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LSM3P62310 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LSM3P62310 SNORA46.1-201ENST00000391069 153 ntBASIC1.63□□□□□ -2.15
LSM3P62310 AL136372.1-201ENST00000403060 228 ntBASIC1.63□□□□□ -2.15
LSM3P62310 SNORD23.1-201ENST00000408212 104 ntBASIC1.63□□□□□ -2.15
LSM3P62310 RNU6-564P-201ENST00000410983 104 ntBASIC1.63□□□□□ -2.15
LSM3P62310 RNU6-272P-201ENST00000411028 104 ntBASIC1.63□□□□□ -2.15
LSM3P62310 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.63□□□□□ -2.15
LSM3P62310 AC008280.1-201ENST00000418851 412 ntBASIC1.63□□□□□ -2.15
LSM3P62310 RPL7L1P10-201ENST00000427790 463 ntBASIC1.63□□□□□ -2.15
LSM3P62310 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.63□□□□□ -2.15
LSM3P62310 GTF2IP20-201ENST00000431663 360 ntBASIC1.63□□□□□ -2.15
LSM3P62310 AL714022.1-201ENST00000439897 151 ntBASIC1.63□□□□□ -2.15
LSM3P62310 AL589880.1-201ENST00000448271 287 ntBASIC1.63□□□□□ -2.15
LSM3P62310 MTCO3P11-201ENST00000455103 774 ntBASIC1.63□□□□□ -2.15
LSM3P62310 ANKRD26P4-201ENST00000455755 950 ntBASIC1.63□□□□□ -2.15
LSM3P62310 KLF3P2-201ENST00000465138 268 ntBASIC1.63□□□□□ -2.15
LSM3P62310 AC116337.2-201ENST00000477662 156 ntBASIC1.63□□□□□ -2.15
LSM3P62310 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LSM3P62310 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.63□□□□□ -2.15
LSM3P62310 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.63□□□□□ -2.15
LSM3P62310 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.63□□□□□ -2.15
LSM3P62310 KLRA1P-201ENST00000503499 986 ntBASIC1.63□□□□□ -2.15
LSM3P62310 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.63□□□□□ -2.15
LSM3P62310 RNA5SP356-201ENST00000515972 94 ntBASIC1.63□□□□□ -2.15
LSM3P62310 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.63□□□□□ -2.15
LSM3P62310 AC008749.1-201ENST00000597650 306 ntBASIC1.63□□□□□ -2.15
LSM3P62310 AC011374.2-201ENST00000607135 526 ntBASIC1.63□□□□□ -2.15
LSM3P62310 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.63□□□□□ -2.15
LSM3P62310 AC244517.12-201ENST00000623581 663 ntBASIC1.63□□□□□ -2.15
LSM3P62310 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.63□□□□□ -2.15
LSM3P62310 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
LSM3P62310 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LSM3P62310 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LSM3P62310 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LSM3P62310 HMGB1P5-201ENST00000255320 642 ntBASIC1.62□□□□□ -2.15
LSM3P62310 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.62□□□□□ -2.15
LSM3P62310 SNORA67.3-201ENST00000384366 140 ntBASIC1.62□□□□□ -2.15
LSM3P62310 RNU6-1197P-201ENST00000391183 107 ntBASIC1.62□□□□□ -2.15
LSM3P62310 AL445529.1-201ENST00000398713 389 ntBASIC1.62□□□□□ -2.15
LSM3P62310 AL450338.1-201ENST00000407987 512 ntBASIC1.62□□□□□ -2.15
LSM3P62310 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.62□□□□□ -2.15
LSM3P62310 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.62□□□□□ -2.15
LSM3P62310 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms