Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MIR544B-201ENST00000582372 78 ntBASIC3.01□□□□□ -1.93
LMO4P61968 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LMO4P61968 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.01□□□□□ -1.93
LMO4P61968 AC006116.10-201ENST00000591836 581 ntBASIC3.01□□□□□ -1.93
LMO4P61968 DUXAP4-201ENST00000603046 613 ntBASIC3.01□□□□□ -1.93
LMO4P61968 AC008945.2-201ENST00000606056 604 ntBASIC3.01□□□□□ -1.93
LMO4P61968 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.01□□□□□ -1.93
LMO4P61968 AC096577.2-201ENST00000611455 153 ntBASIC3.01□□□□□ -1.93
LMO4P61968 Y_RNA.804-201ENST00000615262 101 ntBASIC3.01□□□□□ -1.93
LMO4P61968 AC063943.3-201ENST00000615562 356 ntBASIC3.01□□□□□ -1.93
LMO4P61968 AC068880.5-201ENST00000624331 290 ntBASIC3.01□□□□□ -1.93
LMO4P61968 AP003400.5-201ENST00000624827 617 ntBASIC3.01□□□□□ -1.93
LMO4P61968 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.01□□□□□ -1.93
LMO4P61968 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.01□□□□□ -1.93
LMO4P61968 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
LMO4P61968 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
LMO4P61968 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.01□□□□□ -1.93
LMO4P61968 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LMO4P61968 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3□□□□□ -1.93
LMO4P61968 AC068254.2-201ENST00000623938 3577 ntBASIC3□□□□□ -1.93
LMO4P61968 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3□□□□□ -1.93
LMO4P61968 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3□□□□□ -1.93
LMO4P61968 MIR448-201ENST00000362131 111 ntBASIC3□□□□□ -1.93
LMO4P61968 SNORA31-201ENST00000362607 130 ntBASIC3□□□□□ -1.93
LMO4P61968 RNY4P14-201ENST00000363656 96 ntBASIC3□□□□□ -1.93
LMO4P61968 RNU6-1090P-201ENST00000364065 94 ntBASIC3□□□□□ -1.93
LMO4P61968 SNORD74.4-201ENST00000364129 80 ntBASIC3□□□□□ -1.93
LMO4P61968 MIR490-201ENST00000384865 128 ntBASIC3□□□□□ -1.93
LMO4P61968 GSTA9P-201ENST00000406231 611 ntBASIC3□□□□□ -1.93
LMO4P61968 RNA5SP104-201ENST00000410989 118 ntBASIC3□□□□□ -1.93
LMO4P61968 RNU2-41P-201ENST00000410991 178 ntBASIC3□□□□□ -1.93
LMO4P61968 JKAMPP1-201ENST00000413804 919 ntBASIC3□□□□□ -1.93
LMO4P61968 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3□□□□□ -1.93
LMO4P61968 AC009237.5-201ENST00000414271 501 ntBASIC3□□□□□ -1.93
LMO4P61968 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3□□□□□ -1.93
LMO4P61968 AL139413.1-201ENST00000421309 217 ntBASIC3□□□□□ -1.93
LMO4P61968 ELOCP14-201ENST00000428070 331 ntBASIC3□□□□□ -1.93
LMO4P61968 AC073464.1-201ENST00000429823 534 ntBASIC3□□□□□ -1.93
LMO4P61968 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3□□□□□ -1.93
LMO4P61968 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3□□□□□ -1.93
LMO4P61968 AL358934.1-201ENST00000432346 324 ntBASIC3□□□□□ -1.93
LMO4P61968 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3□□□□□ -1.93
LMO4P61968 ELOCP7-201ENST00000439968 331 ntBASIC3□□□□□ -1.93
LMO4P61968 AL353748.1-201ENST00000440753 474 ntBASIC3□□□□□ -1.93
LMO4P61968 MTND6P13-201ENST00000443510 523 ntBASIC3□□□□□ -1.93
LMO4P61968 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3□□□□□ -1.93
LMO4P61968 DPPA3P1-201ENST00000448050 469 ntBASIC3□□□□□ -1.93
LMO4P61968 GAPDHP17-201ENST00000449858 1001 ntBASIC3□□□□□ -1.93
LMO4P61968 MTND3P10-201ENST00000450967 341 ntBASIC3□□□□□ -1.93
LMO4P61968 AC092001.1-201ENST00000453012 261 ntBASIC3□□□□□ -1.93
LMO4P61968 AMD1P1-201ENST00000457220 922 ntBASIC3□□□□□ -1.93
LMO4P61968 BTF3P5-201ENST00000457252 467 ntBASIC3□□□□□ -1.93
LMO4P61968 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3□□□□□ -1.93
LMO4P61968 AC017015.1-201ENST00000477387 286 ntBASIC3□□□□□ -1.93
LMO4P61968 ARL4AP2-201ENST00000507378 601 ntBASIC3□□□□□ -1.93
LMO4P61968 POU5F1P7-201ENST00000508759 541 ntBASIC3□□□□□ -1.93
LMO4P61968 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3□□□□□ -1.93
LMO4P61968 SNORA20.3-201ENST00000516880 132 ntBASIC3□□□□□ -1.93
LMO4P61968 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3□□□□□ -1.93
LMO4P61968 OR5AQ1P-201ENST00000527596 927 ntBASIC3□□□□□ -1.93
LMO4P61968 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3□□□□□ -1.93
LMO4P61968 AC007458.1-201ENST00000542812 373 ntBASIC3□□□□□ -1.93
LMO4P61968 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3□□□□□ -1.93
LMO4P61968 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3□□□□□ -1.93
LMO4P61968 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3□□□□□ -1.93
LMO4P61968 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3□□□□□ -1.93
LMO4P61968 AC005730.3-201ENST00000583067 366 ntBASIC3□□□□□ -1.93
LMO4P61968 AL161756.2-201ENST00000604597 246 ntBASIC3□□□□□ -1.93
LMO4P61968 BCRP9-201ENST00000605312 388 ntBASIC3□□□□□ -1.93
LMO4P61968 AC006329.2-201ENST00000611491 394 ntBASIC3□□□□□ -1.93
LMO4P61968 AL158196.1-201ENST00000616786 434 ntBASIC3□□□□□ -1.93
LMO4P61968 AC002553.4-201ENST00000616896 331 ntBASIC3□□□□□ -1.93
LMO4P61968 DLEU1_2.1-201ENST00000617920 342 ntBASIC3□□□□□ -1.93
LMO4P61968 AC233309.1-201ENST00000619522 751 ntBASIC3□□□□□ -1.93
LMO4P61968 CYP3A51P-201ENST00000633513 256 ntBASIC3□□□□□ -1.93
LMO4P61968 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3□□□□□ -1.93
LMO4P61968 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
LMO4P61968 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3□□□□□ -1.93
LMO4P61968 MTND4P29-201ENST00000503122 1372 ntBASIC3□□□□□ -1.93
LMO4P61968 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
LMO4P61968 NUP58P1-201ENST00000502546 1738 ntBASIC2.99□□□□□ -1.93
LMO4P61968 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.99□□□□□ -1.93
LMO4P61968 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LMO4P61968 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
LMO4P61968 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LMO4P61968 Y_RNA.38-201ENST00000362617 102 ntBASIC2.99□□□□□ -1.93
LMO4P61968 RNU6-989P-201ENST00000362756 107 ntBASIC2.99□□□□□ -1.93
LMO4P61968 RNA5SP50-201ENST00000363731 107 ntBASIC2.99□□□□□ -1.93
LMO4P61968 SNORA51.2-201ENST00000364595 132 ntBASIC2.99□□□□□ -1.93
LMO4P61968 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.99□□□□□ -1.93
LMO4P61968 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.99□□□□□ -1.93
LMO4P61968 RNU6-1181P-201ENST00000384191 106 ntBASIC2.99□□□□□ -1.93
LMO4P61968 RNVU1-14-201ENST00000384770 164 ntBASIC2.99□□□□□ -1.93
LMO4P61968 MIR23A-201ENST00000385245 73 ntBASIC2.99□□□□□ -1.93
LMO4P61968 AC016769.3-201ENST00000396562 315 ntBASIC2.99□□□□□ -1.93
LMO4P61968 Y_RNA.608-201ENST00000410647 95 ntBASIC2.99□□□□□ -1.93
LMO4P61968 HMGB3P20-201ENST00000417997 600 ntBASIC2.99□□□□□ -1.93
LMO4P61968 AC006548.1-201ENST00000427470 102 ntBASIC2.99□□□□□ -1.93
LMO4P61968 AC097713.2-201ENST00000430199 356 ntBASIC2.99□□□□□ -1.93
LMO4P61968 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms