Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.62□□□□□ -2.15
CKS1BP61024 RNU5F-8P-201ENST00000515941 111 ntBASIC1.62□□□□□ -2.15
CKS1BP61024 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.62□□□□□ -2.15
CKS1BP61024 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CKS1BP61024 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.62□□□□□ -2.15
CKS1BP61024 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.62□□□□□ -2.15
CKS1BP61024 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.62□□□□□ -2.15
CKS1BP61024 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.62□□□□□ -2.15
CKS1BP61024 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.62□□□□□ -2.15
CKS1BP61024 AL121917.1-203ENST00000605534 577 ntBASIC1.62□□□□□ -2.15
CKS1BP61024 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
CKS1BP61024 AC093838.1-201ENST00000613014 469 ntBASIC1.62□□□□□ -2.15
CKS1BP61024 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.62□□□□□ -2.15
CKS1BP61024 AC109809.1-201ENST00000619665 545 ntBASIC1.62□□□□□ -2.15
CKS1BP61024 AL137790.1-201ENST00000634283 177 ntBASIC1.62□□□□□ -2.15
CKS1BP61024 ZNF663P-202ENST00000641770 1131 ntBASIC1.62□□□□□ -2.15
CKS1BP61024 OR5H6-203ENST00000642105 978 ntBASIC1.62□□□□□ -2.15
CKS1BP61024 AC103710.2-202ENST00000641454 2853 ntBASIC1.62□□□□□ -2.15
CKS1BP61024 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
CKS1BP61024 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.61□□□□□ -2.15
CKS1BP61024 AC004520.1-201ENST00000608362 1413 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 DEFB108F-201ENST00000344638 222 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 AL360182.1-201ENST00000397433 468 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 NPM1P10-201ENST00000398310 865 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 RPS4XP8-201ENST00000402039 771 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.61□□□□□ -2.15
CKS1BP61024 RNU6-1328P-201ENST00000410938 106 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 HMGN2P19-201ENST00000425149 265 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 AL035410.1-201ENST00000427409 427 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 MTATP6P11-201ENST00000428071 670 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 UBE2V1P5-201ENST00000440070 405 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 Z82190.1-201ENST00000454534 490 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 RN7SKP24-201ENST00000515888 284 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 RNU1-40P-201ENST00000516816 164 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 RNU1-97P-201ENST00000516872 164 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 AP003467.2-201ENST00000520175 319 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.61□□□□□ -2.15
CKS1BP61024 DEFB108D-201ENST00000527787 222 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 OR4R2P-201ENST00000530815 597 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.61□□□□□ -2.15
CKS1BP61024 OR11H5P-201ENST00000554039 926 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.61□□□□□ -2.15
CKS1BP61024 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CKS1BP61024 MIR3935-201ENST00000583472 104 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 MIR5195-201ENST00000583555 115 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.61□□□□□ -2.15
CKS1BP61024 SUMO2P14-201ENST00000604488 293 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 AC097504.2-201ENST00000608088 454 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.61□□□□□ -2.15
CKS1BP61024 AC008555.8-201ENST00000623602 2168 ntBASIC1.61□□□□□ -2.15
CKS1BP61024 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CKS1BP61024 AP006437.1-201ENST00000641440 3685 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CKS1BP61024 RNU6-7-201ENST00000364784 107 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 RNU6-8-201ENST00000365467 107 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 MIR421-201ENST00000365696 85 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 SNORA44-201ENST00000384584 132 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 MIR196B-201ENST00000384852 84 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 SNORA48.7-201ENST00000391302 135 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 TAF9BP2-201ENST00000400856 499 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.6□□□□□ -2.15
CKS1BP61024 AC099548.1-201ENST00000421443 426 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.6□□□□□ -2.15
CKS1BP61024 AIMP1P2-201ENST00000425294 312 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 AC092017.2-201ENST00000427600 362 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS1BP61024 AL451074.3-201ENST00000437709 472 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 AC068135.1-201ENST00000446164 246 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.6□□□□□ -2.15
CKS1BP61024 SNORD109B-201ENST00000458961 67 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 SNORD109A-201ENST00000459128 67 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 AC015724.1-201ENST00000478577 156 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 AC068781.1-201ENST00000488231 618 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS1BP61024 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.6□□□□□ -2.15
CKS1BP61024 AC147055.4-201ENST00000504399 745 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS1BP61024 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS1BP61024 AC104108.1-201ENST00000509930 412 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CKS1BP61024 SETP12-201ENST00000514068 805 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.6□□□□□ -2.15
CKS1BP61024 SNORA31.13-201ENST00000516624 135 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.6□□□□□ -2.15
CKS1BP61024 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS1BP61024 CYCSP2-201ENST00000558168 301 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 MIR4444-1-201ENST00000581696 74 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 MIR4444-2-201ENST00000584390 74 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 AC005034.5-201ENST00000604219 466 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CKS1BP61024 AP003400.5-201ENST00000624827 617 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 OR8B1P-202ENST00000641132 1178 ntBASIC1.6□□□□□ -2.15
CKS1BP61024 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CKS1BP61024 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.6□□□□□ -2.15
CKS1BP61024 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.15
CKS1BP61024 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CKS1BP61024 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CKS1BP61024 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.59□□□□□ -2.15
CKS1BP61024 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.59□□□□□ -2.15
CKS1BP61024 AC044797.1-201ENST00000445744 679 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms