Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLDN6P56747 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.53□□□□□ -2
CLDN6P56747 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.53□□□□□ -2
CLDN6P56747 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.53□□□□□ -2
CLDN6P56747 RPL9P7-201ENST00000330965 580 ntBASIC2.53□□□□□ -2
CLDN6P56747 RNU5B-1-201ENST00000363286 116 ntBASIC2.53□□□□□ -2
CLDN6P56747 RNU6-207P-201ENST00000384137 107 ntBASIC2.53□□□□□ -2
CLDN6P56747 MIR135A2-201ENST00000384854 100 ntBASIC2.53□□□□□ -2
CLDN6P56747 AC027644.1-201ENST00000419595 298 ntBASIC2.53□□□□□ -2
CLDN6P56747 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.53□□□□□ -2
CLDN6P56747 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.53□□□□□ -2
CLDN6P56747 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.53□□□□□ -2
CLDN6P56747 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLDN6P56747 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.53□□□□□ -2
CLDN6P56747 LSM1P1-201ENST00000438629 273 ntBASIC2.53□□□□□ -2
CLDN6P56747 HMGB3P12-201ENST00000438745 556 ntBASIC2.53□□□□□ -2
CLDN6P56747 UBBP3-201ENST00000445497 241 ntBASIC2.53□□□□□ -2
CLDN6P56747 Z96811.1-201ENST00000445880 108 ntBASIC2.53□□□□□ -2
CLDN6P56747 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.53□□□□□ -2
CLDN6P56747 AL096829.2-201ENST00000446582 742 ntBASIC2.53□□□□□ -2
CLDN6P56747 AL592447.1-201ENST00000447592 540 ntBASIC2.53□□□□□ -2
CLDN6P56747 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.53□□□□□ -2
CLDN6P56747 AL049714.1-201ENST00000466686 347 ntBASIC2.53□□□□□ -2
CLDN6P56747 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.53□□□□□ -2
CLDN6P56747 COX7A2P2-201ENST00000505291 250 ntBASIC2.53□□□□□ -2
CLDN6P56747 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLDN6P56747 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.53□□□□□ -2
CLDN6P56747 AL359273.1-201ENST00000510918 627 ntBASIC2.53□□□□□ -2
CLDN6P56747 snoZ278.1-201ENST00000517059 112 ntBASIC2.53□□□□□ -2
CLDN6P56747 CASP1P1-201ENST00000526345 212 ntBASIC2.53□□□□□ -2
CLDN6P56747 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLDN6P56747 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.53□□□□□ -2
CLDN6P56747 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.53□□□□□ -2
CLDN6P56747 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.53□□□□□ -2
CLDN6P56747 AC125611.2-201ENST00000551907 647 ntBASIC2.53□□□□□ -2
CLDN6P56747 NBEAP1-201ENST00000554452 979 ntBASIC2.53□□□□□ -2
CLDN6P56747 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.53□□□□□ -2
CLDN6P56747 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.53□□□□□ -2
CLDN6P56747 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.53□□□□□ -2
CLDN6P56747 BNIP3P24-201ENST00000593398 557 ntBASIC2.53□□□□□ -2
CLDN6P56747 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.53□□□□□ -2
CLDN6P56747 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.53□□□□□ -2
CLDN6P56747 AC005776.1-201ENST00000603164 290 ntBASIC2.53□□□□□ -2
CLDN6P56747 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.53□□□□□ -2
CLDN6P56747 AP001521.1-201ENST00000609150 300 ntBASIC2.53□□□□□ -2
CLDN6P56747 AC090115.4-201ENST00000609970 188 ntBASIC2.53□□□□□ -2
CLDN6P56747 AC069234.5-201ENST00000611056 416 ntBASIC2.53□□□□□ -2
CLDN6P56747 AL450472.3-201ENST00000615578 367 ntBASIC2.53□□□□□ -2
CLDN6P56747 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
CLDN6P56747 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN6P56747 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN6P56747 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN6P56747 AC006020.1-201ENST00000420179 1854 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CLDN6P56747 DEFB108F-201ENST00000344638 222 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 SNORD21-201ENST00000383953 95 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 SNORA36C-201ENST00000384289 132 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 RNU6-1197P-201ENST00000391183 107 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CLDN6P56747 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN6P56747 RNU2-43P-201ENST00000410306 190 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN6P56747 AL356320.2-201ENST00000417263 507 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN6P56747 BEND7P1-201ENST00000422058 457 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN6P56747 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN6P56747 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN6P56747 YWHAZP7-201ENST00000436906 631 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AL513043.1-201ENST00000439124 535 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 WASF1P1-201ENST00000447560 1131 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN6P56747 MRPL42P4-201ENST00000453267 443 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 USP9YP34-201ENST00000453983 808 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 PNPLA4P1-201ENST00000458328 305 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 RPS20P22-201ENST00000473700 357 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 RPL23AP11-201ENST00000475260 469 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 OR4G11P-201ENST00000492842 939 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AC010460.2-201ENST00000509054 677 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AC008837.1-201ENST00000511513 412 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 DEFB108D-201ENST00000527787 222 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.52□□□□□ -2.01
CLDN6P56747 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CLDN6P56747 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN6P56747 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN6P56747 OR4K8P-201ENST00000578842 1048 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN6P56747 AC023043.3-201ENST00000593113 385 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AC020895.1-201ENST00000595362 272 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AL158827.2-201ENST00000602494 330 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AC005046.1-201ENST00000608515 625 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN6P56747 AC025034.2-201ENST00000623264 286 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AL691447.3-201ENST00000635020 330 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 U6.101-201ENST00000637707 76 ntBASIC2.52□□□□□ -2.01
CLDN6P56747 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN6P56747 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CLDN6P56747 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.52□□□□□ -2.01
CLDN6P56747 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CLDN6P56747 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms