Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GFRA1P56159 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GFRA1P56159 AL445189.1-201ENST00000405722 338 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.45□□□□□ -1.7
GFRA1P56159 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.45□□□□□ -1.7
GFRA1P56159 Z82205.1-201ENST00000428456 297 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.45□□□□□ -1.7
GFRA1P56159 AC006466.1-201ENST00000438721 289 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AL772161.1-201ENST00000439130 476 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GFRA1P56159 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.45□□□□□ -1.7
GFRA1P56159 RPL30P15-201ENST00000457129 321 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 RPL21P41-201ENST00000459863 264 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AC117503.1-201ENST00000472241 394 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 RPL31P60-201ENST00000478450 367 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AC083982.1-201ENST00000485679 344 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
GFRA1P56159 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.45□□□□□ -1.7
GFRA1P56159 MTCYBP40-201ENST00000509390 1135 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 RNU6-1332P-201ENST00000516666 104 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 RNA5SP392-201ENST00000516905 112 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 Y_RNA.711-201ENST00000516993 102 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.45□□□□□ -1.7
GFRA1P56159 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.45□□□□□ -1.7
GFRA1P56159 MIR4480-201ENST00000582492 71 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 MIR4737-201ENST00000583979 81 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
GFRA1P56159 SNRPGP15-201ENST00000600149 222 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AC012119.1-201ENST00000603184 222 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AL157817.1-201ENST00000614264 790 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AC034102.8-201ENST00000615146 484 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 AC244517.12-201ENST00000623581 663 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 CR381572.2-201ENST00000624852 397 ntBASIC4.45□□□□□ -1.7
GFRA1P56159 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GFRA1P56159 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.45□□□□□ -1.7
GFRA1P56159 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GFRA1P56159 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
GFRA1P56159 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
GFRA1P56159 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GFRA1P56159 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.44□□□□□ -1.7
GFRA1P56159 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.44□□□□□ -1.7
GFRA1P56159 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
GFRA1P56159 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
GFRA1P56159 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
GFRA1P56159 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.44□□□□□ -1.7
GFRA1P56159 SNORA73.1-201ENST00000363107 205 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 Y_RNA.197-201ENST00000364004 102 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GFRA1P56159 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
GFRA1P56159 Y_RNA.395-201ENST00000383945 109 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 Y_RNA.480-201ENST00000384364 102 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 RNU6-738P-201ENST00000384531 106 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.44□□□□□ -1.7
GFRA1P56159 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.44□□□□□ -1.7
GFRA1P56159 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.44□□□□□ -1.7
GFRA1P56159 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.44□□□□□ -1.7
GFRA1P56159 ATP5HP2-201ENST00000433885 485 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 MRPS31P2-201ENST00000451581 518 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC091685.2-201ENST00000454924 864 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 RPL23AP56-201ENST00000460778 453 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC104472.2-201ENST00000469035 601 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC092451.1-201ENST00000480211 153 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AL163540.1-201ENST00000485382 386 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 RPS15AP34-201ENST00000487776 387 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC026801.1-201ENST00000497178 464 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.44□□□□□ -1.7
GFRA1P56159 RNU6-914P-201ENST00000516749 109 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC105031.1-201ENST00000518550 476 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC087854.1-201ENST00000519706 414 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.44□□□□□ -1.7
GFRA1P56159 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.44□□□□□ -1.7
GFRA1P56159 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.44□□□□□ -1.7
GFRA1P56159 AC006349.1-201ENST00000555526 235 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.44□□□□□ -1.7
GFRA1P56159 RN7SL652P-201ENST00000577769 300 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC002545.1-201ENST00000592511 181 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC006272.2-201ENST00000594725 163 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
GFRA1P56159 AL355802.3-201ENST00000607571 545 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC131238.1-201ENST00000617135 328 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 AC019206.1-201ENST00000621938 425 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 BMS1P21-201ENST00000634565 365 ntBASIC4.44□□□□□ -1.7
GFRA1P56159 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
GFRA1P56159 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
GFRA1P56159 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
GFRA1P56159 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
GFRA1P56159 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GFRA1P56159 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA1P56159 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA1P56159 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
GFRA1P56159 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
GFRA1P56159 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA1P56159 DEFB108F-201ENST00000344638 222 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 RN7SKP103-201ENST00000363848 320 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 Y_RNA.216-201ENST00000364205 93 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
GFRA1P56159 LAP3P1-201ENST00000403648 294 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 ATG3P1-201ENST00000419507 911 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms