Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL591034.1-201ENST00000407447 340 ntBASIC2.79□□□□□ -1.96
LIM2P55344 MIR1290-201ENST00000408735 78 ntBASIC2.79□□□□□ -1.96
LIM2P55344 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.79□□□□□ -1.96
LIM2P55344 RN7SKP266-201ENST00000410232 287 ntBASIC2.79□□□□□ -1.96
LIM2P55344 RNU6-757P-201ENST00000410334 100 ntBASIC2.79□□□□□ -1.96
LIM2P55344 TPMTP3-201ENST00000411928 735 ntBASIC2.79□□□□□ -1.96
LIM2P55344 NDUFB4P5-201ENST00000415445 361 ntBASIC2.79□□□□□ -1.96
LIM2P55344 SDCBPP3-201ENST00000419629 891 ntBASIC2.79□□□□□ -1.96
LIM2P55344 RPL35AP12-201ENST00000425362 338 ntBASIC2.79□□□□□ -1.96
LIM2P55344 AC079780.1-201ENST00000428259 207 ntBASIC2.79□□□□□ -1.96
LIM2P55344 MTCYBP45-201ENST00000435243 565 ntBASIC2.79□□□□□ -1.96
LIM2P55344 HMGN2P20-201ENST00000437531 273 ntBASIC2.79□□□□□ -1.96
LIM2P55344 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.79□□□□□ -1.96
LIM2P55344 FGF7P5-201ENST00000441829 291 ntBASIC2.79□□□□□ -1.96
LIM2P55344 PAXBP1P1-201ENST00000449315 447 ntBASIC2.79□□□□□ -1.96
LIM2P55344 SSXP4-201ENST00000451349 245 ntBASIC2.79□□□□□ -1.96
LIM2P55344 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.79□□□□□ -1.96
LIM2P55344 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.79□□□□□ -1.96
LIM2P55344 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.79□□□□□ -1.96
LIM2P55344 AC093809.1-201ENST00000509155 340 ntBASIC2.79□□□□□ -1.96
LIM2P55344 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LIM2P55344 AC017037.2-201ENST00000513850 890 ntBASIC2.79□□□□□ -1.96
LIM2P55344 RNU6-528P-201ENST00000516926 100 ntBASIC2.79□□□□□ -1.96
LIM2P55344 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.79□□□□□ -1.96
LIM2P55344 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.79□□□□□ -1.96
LIM2P55344 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.79□□□□□ -1.96
LIM2P55344 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.79□□□□□ -1.96
LIM2P55344 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.79□□□□□ -1.96
LIM2P55344 AC002400.1-201ENST00000569310 726 ntBASIC2.79□□□□□ -1.96
LIM2P55344 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.79□□□□□ -1.96
LIM2P55344 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.79□□□□□ -1.96
LIM2P55344 MIR3921-201ENST00000577308 85 ntBASIC2.79□□□□□ -1.96
LIM2P55344 MIR4474-201ENST00000579189 78 ntBASIC2.79□□□□□ -1.96
LIM2P55344 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.79□□□□□ -1.96
LIM2P55344 AC022022.2-201ENST00000602989 360 ntBASIC2.79□□□□□ -1.96
LIM2P55344 AC013444.2-201ENST00000603317 787 ntBASIC2.79□□□□□ -1.96
LIM2P55344 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.79□□□□□ -1.96
LIM2P55344 AC092106.3-201ENST00000611308 722 ntBASIC2.79□□□□□ -1.96
LIM2P55344 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.79□□□□□ -1.96
LIM2P55344 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
LIM2P55344 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LIM2P55344 AC000403.1-201ENST00000613696 3585 ntBASIC2.79□□□□□ -1.96
LIM2P55344 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LIM2P55344 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
LIM2P55344 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
LIM2P55344 ZNF807-201ENST00000328088 1707 ntBASIC2.79□□□□□ -1.96
LIM2P55344 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
LIM2P55344 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
LIM2P55344 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LIM2P55344 DEFB108F-201ENST00000344638 222 ntBASIC2.78□□□□□ -1.96
LIM2P55344 SNORA51.4-201ENST00000364993 124 ntBASIC2.78□□□□□ -1.96
LIM2P55344 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LIM2P55344 AC119751.3-201ENST00000399720 670 ntBASIC2.78□□□□□ -1.96
LIM2P55344 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.78□□□□□ -1.96
LIM2P55344 RN7SKP58-201ENST00000411010 305 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.78□□□□□ -1.96
LIM2P55344 YPEL5P1-201ENST00000419731 367 ntBASIC2.78□□□□□ -1.96
LIM2P55344 XKRYP1-201ENST00000423438 492 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 AL035407.1-201ENST00000429211 571 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AC022018.1-201ENST00000430685 241 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.78□□□□□ -1.96
LIM2P55344 XKRYP2-201ENST00000432915 492 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.78□□□□□ -1.96
LIM2P55344 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.78□□□□□ -1.96
LIM2P55344 S100A11P2-201ENST00000467589 312 ntBASIC2.78□□□□□ -1.96
LIM2P55344 RPS29P2-201ENST00000479278 136 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AC012181.1-201ENST00000479895 423 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 VN1R104P-201ENST00000505115 1009 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 POU5F1P7-201ENST00000508759 541 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.78□□□□□ -1.96
LIM2P55344 DEFB108D-201ENST00000527787 222 ntBASIC2.78□□□□□ -1.96
LIM2P55344 UBTFL10-201ENST00000528532 562 ntBASIC2.78□□□□□ -1.96
LIM2P55344 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.78□□□□□ -1.96
LIM2P55344 AL354943.1-201ENST00000572103 781 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AC136618.2-201ENST00000575091 400 ntBASIC2.78□□□□□ -1.96
LIM2P55344 MIR3200-201ENST00000580767 85 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.78□□□□□ -1.96
LIM2P55344 AC083760.1-201ENST00000589621 670 ntBASIC2.78□□□□□ -1.96
LIM2P55344 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 AC015871.2-201ENST00000603605 948 ntBASIC2.78□□□□□ -1.96
LIM2P55344 TUSC7.1-201ENST00000610969 165 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AL136981.2-201ENST00000617319 734 ntBASIC2.78□□□□□ -1.96
LIM2P55344 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AC079228.1-201ENST00000624774 1049 ntBASIC2.78□□□□□ -1.96
LIM2P55344 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LIM2P55344 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
LIM2P55344 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LIM2P55344 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LIM2P55344 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
LIM2P55344 SDAD1P2-201ENST00000441308 2028 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms