Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL356967.1-201ENST00000406305 431 ntBASIC3.35□□□□□ -1.87
CDH13P55290 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH13P55290 RNA5SP31-201ENST00000411144 127 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AC078974.1-201ENST00000411597 223 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH13P55290 RPL17P12-201ENST00000413391 526 ntBASIC3.35□□□□□ -1.87
CDH13P55290 RPS7P13-201ENST00000413955 498 ntBASIC3.35□□□□□ -1.87
CDH13P55290 Z99755.1-201ENST00000414048 380 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AL356968.1-201ENST00000416622 474 ntBASIC3.35□□□□□ -1.87
CDH13P55290 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH13P55290 AC090960.1-201ENST00000421072 306 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH13P55290 AC092017.2-201ENST00000427600 362 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH13P55290 ISCA1P2-201ENST00000438679 421 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AL049734.2-201ENST00000441066 616 ntBASIC3.35□□□□□ -1.87
CDH13P55290 NOTCH2P1-201ENST00000443481 624 ntBASIC3.35□□□□□ -1.87
CDH13P55290 EPS15P1-201ENST00000448836 336 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AL162389.1-201ENST00000449233 177 ntBASIC3.35□□□□□ -1.87
CDH13P55290 RNU7-59P-201ENST00000459101 61 ntBASIC3.35□□□□□ -1.87
CDH13P55290 RPS23P3-201ENST00000470993 430 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH13P55290 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH13P55290 AC025881.1-201ENST00000518851 512 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH13P55290 AC087373.1-201ENST00000524920 491 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AP001804.3-201ENST00000525146 880 ntBASIC3.35□□□□□ -1.87
CDH13P55290 MTND4LP18-201ENST00000526864 291 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AP000857.1-201ENST00000532151 543 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH13P55290 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH13P55290 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH13P55290 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH13P55290 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH13P55290 AL603758.1-201ENST00000618654 241 ntBASIC3.35□□□□□ -1.87
CDH13P55290 AC110801.1-201ENST00000623590 212 ntBASIC3.35□□□□□ -1.87
CDH13P55290 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH13P55290 ZNF807-201ENST00000328088 1707 ntBASIC3.35□□□□□ -1.87
CDH13P55290 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH13P55290 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH13P55290 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH13P55290 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH13P55290 AC091152.2-201ENST00000591628 2569 ntBASIC3.34□□□□□ -1.87
CDH13P55290 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH13P55290 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH13P55290 RNU5A-1-201ENST00000362698 116 ntBASIC3.34□□□□□ -1.87
CDH13P55290 RNU6-805P-201ENST00000365643 106 ntBASIC3.34□□□□□ -1.87
CDH13P55290 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH13P55290 RPL21P17-201ENST00000397467 475 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AL109755.1-201ENST00000401791 649 ntBASIC3.34□□□□□ -1.87
CDH13P55290 U3.42-201ENST00000408746 214 ntBASIC3.34□□□□□ -1.87
CDH13P55290 RNA5SP293-201ENST00000410527 113 ntBASIC3.34□□□□□ -1.87
CDH13P55290 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH13P55290 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH13P55290 AC007390.1-201ENST00000415722 356 ntBASIC3.34□□□□□ -1.87
CDH13P55290 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.34□□□□□ -1.87
CDH13P55290 UBE2D3P2-201ENST00000424409 445 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AL353777.1-201ENST00000425552 326 ntBASIC3.34□□□□□ -1.87
CDH13P55290 RPL23AP82-202ENST00000427528 469 ntBASIC3.34□□□□□ -1.87
CDH13P55290 BX890604.2-201ENST00000427883 474 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH13P55290 FTH1P1-201ENST00000437933 532 ntBASIC3.34□□□□□ -1.87
CDH13P55290 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 UBE2D3P4-201ENST00000441973 436 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AC118469.1-201ENST00000442943 488 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.34□□□□□ -1.87
CDH13P55290 CENPBD1P1-201ENST00000464061 469 ntBASIC3.34□□□□□ -1.87
CDH13P55290 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH13P55290 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH13P55290 AC116337.2-201ENST00000477662 156 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AP000797.1-201ENST00000478870 387 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AC021205.2-201ENST00000480069 347 ntBASIC3.34□□□□□ -1.87
CDH13P55290 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AC107934.2-201ENST00000518653 310 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 HIGD1AP10-201ENST00000527837 282 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AP000907.2-201ENST00000530827 353 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH13P55290 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH13P55290 AL133153.1-201ENST00000557756 303 ntBASIC3.34□□□□□ -1.87
CDH13P55290 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH13P55290 AC007038.2-201ENST00000608095 740 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AL355472.4-201ENST00000610233 626 ntBASIC3.34□□□□□ -1.87
CDH13P55290 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH13P55290 TUG1_2.1-201ENST00000614234 87 ntBASIC3.34□□□□□ -1.87
CDH13P55290 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.34□□□□□ -1.87
CDH13P55290 XIST_intron.1-201ENST00000619444 68 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AC068057.2-201ENST00000624047 895 ntBASIC3.34□□□□□ -1.87
CDH13P55290 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH13P55290 AC008568.2-201ENST00000623862 2313 ntBASIC3.34□□□□□ -1.87
CDH13P55290 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH13P55290 MTND4P4-201ENST00000439033 1366 ntBASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms