Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.24□□□□□ -1.89
VCPP55072 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.24□□□□□ -1.89
VCPP55072 FAM60BP-201ENST00000578364 658 ntBASIC3.24□□□□□ -1.89
VCPP55072 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.24□□□□□ -1.89
VCPP55072 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.24□□□□□ -1.89
VCPP55072 AC106900.2-201ENST00000604994 317 ntBASIC3.24□□□□□ -1.89
VCPP55072 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.24□□□□□ -1.89
VCPP55072 AC099506.2-201ENST00000623074 221 ntBASIC3.24□□□□□ -1.89
VCPP55072 CYP3A51P-201ENST00000633513 256 ntBASIC3.24□□□□□ -1.89
VCPP55072 NUP58P1-201ENST00000502546 1738 ntBASIC3.24□□□□□ -1.89
VCPP55072 AC092435.3-201ENST00000565538 3654 ntBASIC3.24□□□□□ -1.89
VCPP55072 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.24□□□□□ -1.89
VCPP55072 MTCO1P23-201ENST00000415223 1526 ntBASIC3.24□□□□□ -1.89
VCPP55072 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.24□□□□□ -1.89
VCPP55072 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
VCPP55072 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VCPP55072 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
VCPP55072 OR1S2-201ENST00000302592 978 ntBASIC3.23□□□□□ -1.89
VCPP55072 Y_RNA.465-201ENST00000384293 102 ntBASIC3.23□□□□□ -1.89
VCPP55072 RSL24D1P4-201ENST00000400938 484 ntBASIC3.23□□□□□ -1.89
VCPP55072 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.23□□□□□ -1.89
VCPP55072 U3.42-201ENST00000408746 214 ntBASIC3.23□□□□□ -1.89
VCPP55072 RNA5SP38-201ENST00000410750 119 ntBASIC3.23□□□□□ -1.89
VCPP55072 AC068533.2-201ENST00000411872 306 ntBASIC3.23□□□□□ -1.89
VCPP55072 AC092447.6-201ENST00000414578 210 ntBASIC3.23□□□□□ -1.89
VCPP55072 SSR1P2-201ENST00000415208 787 ntBASIC3.23□□□□□ -1.89
VCPP55072 USP9YP11-201ENST00000427537 717 ntBASIC3.23□□□□□ -1.89
VCPP55072 AC084290.1-201ENST00000434995 374 ntBASIC3.23□□□□□ -1.89
VCPP55072 AC092427.1-201ENST00000439177 601 ntBASIC3.23□□□□□ -1.89
VCPP55072 RPL7P36-201ENST00000444633 681 ntBASIC3.23□□□□□ -1.89
VCPP55072 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.23□□□□□ -1.89
VCPP55072 RPS26P21-201ENST00000475397 348 ntBASIC3.23□□□□□ -1.89
VCPP55072 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.23□□□□□ -1.89
VCPP55072 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.23□□□□□ -1.89
VCPP55072 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.23□□□□□ -1.89
VCPP55072 AC018630.1-201ENST00000541376 925 ntBASIC3.23□□□□□ -1.89
VCPP55072 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VCPP55072 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.23□□□□□ -1.89
VCPP55072 VN1R78P-201ENST00000597393 564 ntBASIC3.23□□□□□ -1.89
VCPP55072 AC069304.2-201ENST00000605154 435 ntBASIC3.23□□□□□ -1.89
VCPP55072 AL450336.1-201ENST00000605180 586 ntBASIC3.23□□□□□ -1.89
VCPP55072 ATP1B3P1-201ENST00000605365 821 ntBASIC3.23□□□□□ -1.89
VCPP55072 AC055876.5-201ENST00000605667 259 ntBASIC3.23□□□□□ -1.89
VCPP55072 AC068787.1-201ENST00000623908 691 ntBASIC3.23□□□□□ -1.89
VCPP55072 U6.101-201ENST00000637707 76 ntBASIC3.23□□□□□ -1.89
VCPP55072 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.23□□□□□ -1.89
VCPP55072 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VCPP55072 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VCPP55072 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VCPP55072 SNORA14A-201ENST00000364773 135 ntBASIC3.22□□□□□ -1.89
VCPP55072 MIR887-201ENST00000401258 79 ntBASIC3.22□□□□□ -1.89
VCPP55072 AL592310.1-201ENST00000414330 671 ntBASIC3.22□□□□□ -1.89
VCPP55072 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.22□□□□□ -1.89
VCPP55072 AL513477.1-202ENST00000417061 214 ntBASIC3.22□□□□□ -1.89
VCPP55072 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.22□□□□□ -1.89
VCPP55072 MTND2P20-201ENST00000440805 661 ntBASIC3.22□□□□□ -1.89
VCPP55072 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.22□□□□□ -1.89
VCPP55072 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.22□□□□□ -1.89
VCPP55072 AC016696.1-201ENST00000446949 318 ntBASIC3.22□□□□□ -1.89
VCPP55072 PTENP1-201ENST00000447117 1215 ntBASIC3.22□□□□□ -1.89
VCPP55072 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.22□□□□□ -1.89
VCPP55072 RPL39P6-201ENST00000448289 150 ntBASIC3.22□□□□□ -1.89
VCPP55072 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.22□□□□□ -1.89
VCPP55072 ARL4AP2-201ENST00000507378 601 ntBASIC3.22□□□□□ -1.89
VCPP55072 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.22□□□□□ -1.89
VCPP55072 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
VCPP55072 AP001372.4-201ENST00000524889 472 ntBASIC3.22□□□□□ -1.89
VCPP55072 AP001804.3-201ENST00000525146 880 ntBASIC3.22□□□□□ -1.89
VCPP55072 SLC2A13P1-201ENST00000531560 322 ntBASIC3.22□□□□□ -1.89
VCPP55072 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.22□□□□□ -1.89
VCPP55072 AC090695.1-201ENST00000561269 1222 ntBASIC3.22□□□□□ -1.89
VCPP55072 DUXAP3-201ENST00000603616 594 ntBASIC3.22□□□□□ -1.89
VCPP55072 AC106791.2-201ENST00000604680 391 ntBASIC3.22□□□□□ -1.89
VCPP55072 AC009570.1-201ENST00000609599 745 ntBASIC3.22□□□□□ -1.89
VCPP55072 AC106028.5-201ENST00000610332 395 ntBASIC3.22□□□□□ -1.89
VCPP55072 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.22□□□□□ -1.89
VCPP55072 AC109809.1-201ENST00000619665 545 ntBASIC3.22□□□□□ -1.89
VCPP55072 AC023510.2-201ENST00000622162 746 ntBASIC3.22□□□□□ -1.89
VCPP55072 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.22□□□□□ -1.89
VCPP55072 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.22□□□□□ -1.89
VCPP55072 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.22□□□□□ -1.89
VCPP55072 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
VCPP55072 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VCPP55072 Y_RNA.192-201ENST00000363977 102 ntBASIC3.21□□□□□ -1.9
VCPP55072 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
VCPP55072 U3.29-201ENST00000391296 212 ntBASIC3.21□□□□□ -1.9
VCPP55072 CYCSP45-201ENST00000402289 315 ntBASIC3.21□□□□□ -1.9
VCPP55072 RN7SKP220-201ENST00000410611 288 ntBASIC3.21□□□□□ -1.9
VCPP55072 RN7SKP123-201ENST00000410732 291 ntBASIC3.21□□□□□ -1.9
VCPP55072 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.21□□□□□ -1.9
VCPP55072 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.21□□□□□ -1.9
VCPP55072 ATP5F1P1-201ENST00000433775 569 ntBASIC3.21□□□□□ -1.9
VCPP55072 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.21□□□□□ -1.9
VCPP55072 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.21□□□□□ -1.9
VCPP55072 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.21□□□□□ -1.9
VCPP55072 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.21□□□□□ -1.9
VCPP55072 AC108860.1-201ENST00000484521 383 ntBASIC3.21□□□□□ -1.9
VCPP55072 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.21□□□□□ -1.9
VCPP55072 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.21□□□□□ -1.9
VCPP55072 AC111000.2-201ENST00000507775 550 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms