Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.39□□□□□ -1.87
LHX1P48742 MIR3200-201ENST00000580767 85 ntBASIC3.39□□□□□ -1.87
LHX1P48742 AP001004.1-201ENST00000582468 324 ntBASIC3.39□□□□□ -1.87
LHX1P48742 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.39□□□□□ -1.87
LHX1P48742 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.39□□□□□ -1.87
LHX1P48742 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.39□□□□□ -1.87
LHX1P48742 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LHX1P48742 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.39□□□□□ -1.87
LHX1P48742 AC122133.1-201ENST00000613964 233 ntBASIC3.39□□□□□ -1.87
LHX1P48742 AL355810.1-201ENST00000614629 552 ntBASIC3.39□□□□□ -1.87
LHX1P48742 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.39□□□□□ -1.87
LHX1P48742 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LHX1P48742 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LHX1P48742 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LHX1P48742 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.39□□□□□ -1.87
LHX1P48742 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.39□□□□□ -1.87
LHX1P48742 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LHX1P48742 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LHX1P48742 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LHX1P48742 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LHX1P48742 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.38□□□□□ -1.87
LHX1P48742 RNU6-50P-201ENST00000362356 103 ntBASIC3.38□□□□□ -1.87
LHX1P48742 RNA5SP374-201ENST00000362939 125 ntBASIC3.38□□□□□ -1.87
LHX1P48742 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.38□□□□□ -1.87
LHX1P48742 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LHX1P48742 MIR184-201ENST00000384962 84 ntBASIC3.38□□□□□ -1.87
LHX1P48742 RNA5SP129-201ENST00000410276 118 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX1P48742 MTND2P18-201ENST00000419962 1030 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX1P48742 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.38□□□□□ -1.87
LHX1P48742 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LHX1P48742 AC004866.2-201ENST00000438285 481 ntBASIC3.38□□□□□ -1.87
LHX1P48742 HMGB1P12-201ENST00000438594 598 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AC108734.1-201ENST00000439549 399 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AC112653.1-201ENST00000443851 386 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.38□□□□□ -1.87
LHX1P48742 HMGN1P18-201ENST00000457642 277 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AC005178.1-201ENST00000508392 440 ntBASIC3.38□□□□□ -1.87
LHX1P48742 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.38□□□□□ -1.87
LHX1P48742 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX1P48742 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.38□□□□□ -1.87
LHX1P48742 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX1P48742 RNU6-759P-201ENST00000516740 103 ntBASIC3.38□□□□□ -1.87
LHX1P48742 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.38□□□□□ -1.87
LHX1P48742 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX1P48742 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX1P48742 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.38□□□□□ -1.87
LHX1P48742 AC011602.1-201ENST00000546484 331 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AC090888.1-201ENST00000561335 1141 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX1P48742 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX1P48742 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX1P48742 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.38□□□□□ -1.87
LHX1P48742 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.38□□□□□ -1.87
LHX1P48742 Z99129.2-201ENST00000619967 314 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AF246928.1-201ENST00000623768 87 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AC026422.1-201ENST00000623961 452 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AC092192.1-201ENST00000633154 1018 ntBASIC3.38□□□□□ -1.87
LHX1P48742 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
LHX1P48742 MIR622-201ENST00000638396 96 ntBASIC3.38□□□□□ -1.87
LHX1P48742 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LHX1P48742 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.37□□□□□ -1.87
LHX1P48742 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
LHX1P48742 RNU6-553P-201ENST00000364047 96 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AP002088.1-201ENST00000382740 395 ntBASIC3.37□□□□□ -1.87
LHX1P48742 Y_RNA.560-201ENST00000384689 102 ntBASIC3.37□□□□□ -1.87
LHX1P48742 RN7SKP285-201ENST00000410137 318 ntBASIC3.37□□□□□ -1.87
LHX1P48742 RNA5SP31-201ENST00000411144 127 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AL445669.1-201ENST00000426743 755 ntBASIC3.37□□□□□ -1.87
LHX1P48742 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.37□□□□□ -1.87
LHX1P48742 UBE2V1P13-201ENST00000436983 439 ntBASIC3.37□□□□□ -1.87
LHX1P48742 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX1P48742 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX1P48742 AC115115.1-201ENST00000449927 248 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX1P48742 AC078785.3-201ENST00000476607 425 ntBASIC3.37□□□□□ -1.87
LHX1P48742 RPL7P23-201ENST00000493874 747 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX1P48742 RNA5SP468-201ENST00000516782 93 ntBASIC3.37□□□□□ -1.87
LHX1P48742 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX1P48742 MTND2P38-201ENST00000522536 667 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.37□□□□□ -1.87
LHX1P48742 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX1P48742 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX1P48742 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.37□□□□□ -1.87
LHX1P48742 MTCYBP22-201ENST00000603788 447 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AC068313.1-201ENST00000604028 1008 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AC025811.1-201ENST00000604312 472 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AC112187.2-201ENST00000604345 283 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AL158211.4-201ENST00000606988 584 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AL592295.2-201ENST00000612578 206 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AC008121.2-201ENST00000614647 523 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.37□□□□□ -1.87
LHX1P48742 AL356266.1-201ENST00000623311 483 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AC095031.1-201ENST00000623685 672 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AC091903.1-201ENST00000624322 454 ntBASIC3.37□□□□□ -1.87
LHX1P48742 AC097655.1-201ENST00000635075 318 ntBASIC3.37□□□□□ -1.87
LHX1P48742 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
LHX1P48742 TAB3P1-202ENST00000452645 1634 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms