Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AP001646.1-201ENST00000527936 915 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC068587.5-201ENST00000528506 175 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX2P48431 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.64□□□□□ -1.83
SOX2P48431 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX2P48431 AC125611.2-201ENST00000551907 647 ntBASIC3.64□□□□□ -1.83
SOX2P48431 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX2P48431 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.64□□□□□ -1.83
SOX2P48431 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX2P48431 XIAPP1-201ENST00000603162 600 ntBASIC3.64□□□□□ -1.83
SOX2P48431 FAM25E-202ENST00000608562 189 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC128687.2-201ENST00000609657 566 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AL450472.3-201ENST00000615578 367 ntBASIC3.64□□□□□ -1.83
SOX2P48431 SNHG22-203ENST00000617833 660 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AP005264.7-201ENST00000625003 745 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC140479.6-201ENST00000633535 357 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AL773545.4-201ENST00000637262 310 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AC138649.5-201ENST00000637456 137 ntBASIC3.64□□□□□ -1.83
SOX2P48431 AL513478.4-201ENST00000641636 310 ntBASIC3.64□□□□□ -1.83
SOX2P48431 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX2P48431 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX2P48431 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SOX2P48431 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SOX2P48431 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SOX2P48431 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SOX2P48431 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SOX2P48431 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SOX2P48431 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SOX2P48431 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX2P48431 AC006020.1-201ENST00000420179 1854 ntBASIC3.63□□□□□ -1.83
SOX2P48431 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX2P48431 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX2P48431 Y_RNA.255-201ENST00000364581 97 ntBASIC3.63□□□□□ -1.83
SOX2P48431 RNU6-996P-201ENST00000365438 107 ntBASIC3.63□□□□□ -1.83
SOX2P48431 RNU5E-6P-201ENST00000365574 115 ntBASIC3.63□□□□□ -1.83
SOX2P48431 RNA5SP87-201ENST00000384155 118 ntBASIC3.63□□□□□ -1.83
SOX2P48431 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX2P48431 SNORA11B-201ENST00000408175 129 ntBASIC3.63□□□□□ -1.83
SOX2P48431 OR9R1P-201ENST00000412200 877 ntBASIC3.63□□□□□ -1.83
SOX2P48431 SDCBPP3-201ENST00000419629 891 ntBASIC3.63□□□□□ -1.83
SOX2P48431 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX2P48431 AC012498.1-201ENST00000424037 437 ntBASIC3.63□□□□□ -1.83
SOX2P48431 AL157831.1-201ENST00000426134 473 ntBASIC3.63□□□□□ -1.83
SOX2P48431 ZNF863P-201ENST00000426746 417 ntBASIC3.63□□□□□ -1.83
SOX2P48431 ATP5JP1-201ENST00000431631 322 ntBASIC3.63□□□□□ -1.83
SOX2P48431 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX2P48431 AL359265.2-201ENST00000434367 631 ntBASIC3.63□□□□□ -1.83
SOX2P48431 MTATP6P16-201ENST00000434543 526 ntBASIC3.63□□□□□ -1.83
SOX2P48431 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX2P48431 RPL12P3-201ENST00000440080 396 ntBASIC3.63□□□□□ -1.83
SOX2P48431 MTCO3P45-201ENST00000443036 613 ntBASIC3.63□□□□□ -1.83
SOX2P48431 PHBP16-201ENST00000446318 950 ntBASIC3.63□□□□□ -1.83
SOX2P48431 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX2P48431 RPL23AP2-201ENST00000471227 466 ntBASIC3.63□□□□□ -1.83
SOX2P48431 AC233702.1-201ENST00000482905 502 ntBASIC3.63□□□□□ -1.83
SOX2P48431 AF213884.1-201ENST00000488102 463 ntBASIC3.63□□□□□ -1.83
SOX2P48431 MTCYBP18-201ENST00000501056 747 ntBASIC3.63□□□□□ -1.83
SOX2P48431 PCBP2P3-201ENST00000509726 843 ntBASIC3.63□□□□□ -1.83
SOX2P48431 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX2P48431 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX2P48431 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX2P48431 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX2P48431 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX2P48431 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX2P48431 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SOX2P48431 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX2P48431 AC010591.1-201ENST00000603941 649 ntBASIC3.63□□□□□ -1.83
SOX2P48431 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX2P48431 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.63□□□□□ -1.83
SOX2P48431 AC130324.3-201ENST00000614165 542 ntBASIC3.63□□□□□ -1.83
SOX2P48431 MIR4727-201ENST00000622232 55 ntBASIC3.63□□□□□ -1.83
SOX2P48431 AC091953.3-201ENST00000623220 236 ntBASIC3.63□□□□□ -1.83
SOX2P48431 MIR4275-201ENST00000636486 87 ntBASIC3.63□□□□□ -1.83
SOX2P48431 AC024614.3-201ENST00000637860 256 ntBASIC3.63□□□□□ -1.83
SOX2P48431 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SOX2P48431 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.63□□□□□ -1.83
SOX2P48431 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SOX2P48431 AC008725.1-201ENST00000605123 2263 ntBASIC3.63□□□□□ -1.83
SOX2P48431 GABPAP-201ENST00000419271 1356 ntBASIC3.63□□□□□ -1.83
SOX2P48431 AC116667.1-201ENST00000604855 2072 ntBASIC3.63□□□□□ -1.83
SOX2P48431 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SOX2P48431 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SOX2P48431 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SOX2P48431 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
SOX2P48431 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SOX2P48431 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SOX2P48431 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SOX2P48431 Y_RNA.70-201ENST00000362886 110 ntBASIC3.62□□□□□ -1.83
SOX2P48431 RPL21P111-201ENST00000418453 477 ntBASIC3.62□□□□□ -1.83
SOX2P48431 CYP4F29P-201ENST00000420685 446 ntBASIC3.62□□□□□ -1.83
SOX2P48431 AC244098.2-201ENST00000422068 99 ntBASIC3.62□□□□□ -1.83
SOX2P48431 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 AC090774.1-201ENST00000435925 246 ntBASIC3.62□□□□□ -1.83
SOX2P48431 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 CACYBPP2-201ENST00000453625 678 ntBASIC3.62□□□□□ -1.83
SOX2P48431 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 RNU7-182P-201ENST00000459009 62 ntBASIC3.62□□□□□ -1.83
SOX2P48431 AL163973.1-201ENST00000484753 577 ntBASIC3.62□□□□□ -1.83
SOX2P48431 AC069499.1-201ENST00000489433 509 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms