Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MTND3P17-201ENST00000416968 344 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 PIGFP2-201ENST00000421400 651 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-1P43699 AL589872.1-201ENST00000426602 288 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AL356867.1-201ENST00000429623 299 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 RPL22P17-201ENST00000438729 315 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 TXNP1-201ENST00000441872 371 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 USP9YP15-201ENST00000442391 422 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.11□□□□□ -1.91
NKX2-1P43699 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 MTND1P12-201ENST00000455231 147 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC108059.3-201ENST00000456388 214 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AL132838.2-201ENST00000492041 314 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AC138853.1-201ENST00000503549 823 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC026784.1-201ENST00000507986 352 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 RN7SKP13-201ENST00000515933 244 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 Y_RNA.672-201ENST00000516289 104 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 SNORA70.16-201ENST00000516390 95 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 RNU6-798P-201ENST00000516912 103 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 IGKV2-23-201ENST00000518729 323 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC022616.6-201ENST00000520479 119 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC087369.1-201ENST00000520775 996 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AC100870.1-201ENST00000522035 505 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC008489.1-201ENST00000524271 483 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-1P43699 AC022880.1-201ENST00000534017 973 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AL133271.1-201ENST00000538229 291 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AL133153.1-201ENST00000557756 303 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 HSPE1P5-201ENST00000561489 272 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX2-1P43699 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX2-1P43699 AL356432.3-201ENST00000568952 465 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 HMGN1P30-201ENST00000589286 268 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 KLKP1-201ENST00000595979 403 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 DUXAP4-201ENST00000603046 613 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC008745.1-201ENST00000604064 271 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC005332.10-201ENST00000612725 619 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 TUG1_2.1-201ENST00000614234 87 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC091834.1-201ENST00000614543 472 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 AC099842.1-201ENST00000619919 596 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-1P43699 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
NKX2-1P43699 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.11□□□□□ -1.91
NKX2-1P43699 MTND4P5-201ENST00000435821 1374 ntBASIC3.11□□□□□ -1.91
NKX2-1P43699 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
NKX2-1P43699 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NKX2-1P43699 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.1□□□□□ -1.91
NKX2-1P43699 AC008568.2-201ENST00000623862 2313 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-1P43699 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-1P43699 AC093908.1-201ENST00000623125 8092 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-1P43699 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
NKX2-1P43699 RNU5A-8P-201ENST00000364102 114 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-1P43699 SNORA36C-201ENST00000384289 132 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NKX2-1P43699 FCF1P10-201ENST00000407590 479 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AL031779.1-201ENST00000415663 330 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AC007390.1-201ENST00000415722 356 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.1□□□□□ -1.91
NKX2-1P43699 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-1P43699 AC093156.1-201ENST00000440382 670 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 RPL7P15-201ENST00000461190 712 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-1P43699 UQCRHP4-201ENST00000471686 272 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AC007537.2-201ENST00000472093 511 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.1□□□□□ -1.91
NKX2-1P43699 PPIAP15-201ENST00000479662 484 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-1P43699 AC108475.1-201ENST00000507880 950 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NKX2-1P43699 RN7SKP60-201ENST00000516985 239 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 RNU6-1231P-201ENST00000517185 103 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.1□□□□□ -1.91
NKX2-1P43699 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.1□□□□□ -1.91
NKX2-1P43699 FAM60DP-201ENST00000524174 632 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AP001804.3-201ENST00000525146 880 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.1□□□□□ -1.91
NKX2-1P43699 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.1□□□□□ -1.91
NKX2-1P43699 AC009063.1-201ENST00000563342 702 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.1□□□□□ -1.91
NKX2-1P43699 MIR3146-201ENST00000580367 79 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.1□□□□□ -1.91
NKX2-1P43699 KC877982.1-201ENST00000602313 470 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AL161729.4-201ENST00000604650 476 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AL021997.1-201ENST00000605757 193 ntBASIC3.1□□□□□ -1.91
NKX2-1P43699 AL139286.2-201ENST00000606838 396 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms