Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA4P43681 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA4P43681 PSMA6P4-201ENST00000603247 718 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 AC012443.1-201ENST00000605605 231 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA4P43681 AL359547.2-201ENST00000615810 418 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 AC004817.4-201ENST00000602396 3625 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.22□□□□□ -1.57
CHRNA4P43681 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA4P43681 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA4P43681 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA4P43681 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA4P43681 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.22□□□□□ -1.57
CHRNA4P43681 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA4P43681 AL445437.1-201ENST00000623157 3087 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CHRNA4P43681 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.57
CHRNA4P43681 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.21□□□□□ -1.57
CHRNA4P43681 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.21□□□□□ -1.57
CHRNA4P43681 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA4P43681 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA4P43681 AC063976.2-201ENST00000425667 3556 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 RNU1-85P-201ENST00000364127 164 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 Y_RNA.273-201ENST00000364703 102 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 RNU6-434P-201ENST00000384376 107 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 MIR600-201ENST00000385007 98 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 MIR628-201ENST00000385229 95 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 AL023807.1-201ENST00000407932 359 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 MIR1286-201ENST00000408112 78 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 MIR1182-201ENST00000408363 97 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 COX5BP7-201ENST00000414780 274 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA4P43681 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA4P43681 VTI1BP4-201ENST00000427516 527 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 CEACAMP7-201ENST00000444105 496 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 BTF3P6-201ENST00000448054 499 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA4P43681 RNU7-59P-201ENST00000459101 61 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 AP001992.1-205ENST00000462248 379 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 AC092436.3-201ENST00000511788 257 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA4P43681 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA4P43681 IGLV2-28-201ENST00000520681 304 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA4P43681 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.21□□□□□ -1.58
CHRNA4P43681 AC090615.1-201ENST00000577519 154 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 MIR1269B-201ENST00000580405 75 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA4P43681 AC008521.1-201ENST00000587471 187 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 AP005432.2-201ENST00000608162 586 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 AC104465.1-201ENST00000611365 139 ntBASIC5.21□□□□□ -1.58
CHRNA4P43681 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHRNA4P43681 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA4P43681 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CHRNA4P43681 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA4P43681 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA4P43681 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA4P43681 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA4P43681 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
CHRNA4P43681 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA4P43681 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHRNA4P43681 PABPC1P6-201ENST00000445594 1829 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA4P43681 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.2□□□□□ -1.58
CHRNA4P43681 AC022031.1-201ENST00000585985 2593 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA4P43681 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA4P43681 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CHRNA4P43681 RNU6-1298P-201ENST00000362456 101 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 Y_RNA.151-201ENST00000363566 112 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 RNU6-960P-201ENST00000364056 120 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 RNA5SP187-201ENST00000384400 119 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 MIR649-201ENST00000384843 97 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 MIR105-2-201ENST00000385083 81 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 RPL21P67-201ENST00000402896 478 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNA4P43681 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNA4P43681 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNA4P43681 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.2□□□□□ -1.58
CHRNA4P43681 TPT1P12-201ENST00000448968 492 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 AC072052.1-201ENST00000496556 306 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 RBBP4P6-201ENST00000508098 202 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 Y_RNA.687-201ENST00000516558 91 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CHRNA4P43681 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.2□□□□□ -1.58
CHRNA4P43681 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.2□□□□□ -1.58
CHRNA4P43681 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.2□□□□□ -1.58
CHRNA4P43681 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.2□□□□□ -1.58
CHRNA4P43681 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.2□□□□□ -1.58
CHRNA4P43681 AL138889.2-201ENST00000603883 242 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 AL022394.1-201ENST00000606979 292 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 AC126915.2-201ENST00000610957 190 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 AL596245.1-201ENST00000618994 362 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 AC074140.1-201ENST00000621617 208 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.2□□□□□ -1.58
CHRNA4P43681 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CHRNA4P43681 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHRNA4P43681 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CHRNA4P43681 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms