Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HTTP42858 AC021382.1-201ENST00000483523 359 ntBASIC1.54□□□□□ -2.16
HTTP42858 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.54□□□□□ -2.16
HTTP42858 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.54□□□□□ -2.16
HTTP42858 PRELID2P1-201ENST00000552837 301 ntBASIC1.54□□□□□ -2.16
HTTP42858 AL590099.1-201ENST00000615276 138 ntBASIC1.54□□□□□ -2.16
HTTP42858 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.54□□□□□ -2.16
HTTP42858 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.54□□□□□ -2.16
HTTP42858 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
HTTP42858 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.54□□□□□ -2.16
HTTP42858 AC103810.8-201ENST00000607347 118 ntBASIC1.54□□□□□ -2.16
HTTP42858 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.54□□□□□ -2.16
HTTP42858 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HTTP42858 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HTTP42858 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
HTTP42858 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.53□□□□□ -2.16
HTTP42858 MIR222-201ENST00000384992 110 ntBASIC1.53□□□□□ -2.16
HTTP42858 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.53□□□□□ -2.16
HTTP42858 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.53□□□□□ -2.16
HTTP42858 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.53□□□□□ -2.16
HTTP42858 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.53□□□□□ -2.16
HTTP42858 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.53□□□□□ -2.16
HTTP42858 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.53□□□□□ -2.16
HTTP42858 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.53□□□□□ -2.16
HTTP42858 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HTTP42858 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HTTP42858 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.53□□□□□ -2.16
HTTP42858 MTCYBP45-201ENST00000435243 565 ntBASIC1.53□□□□□ -2.16
HTTP42858 OR10R1P-201ENST00000441524 1141 ntBASIC1.53□□□□□ -2.16
HTTP42858 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HTTP42858 MKKS-204ENST00000639674 192 ntBASIC1.53□□□□□ -2.16
HTTP42858 AC000367.1-201ENST00000452711 1766 ntBASIC1.53□□□□□ -2.16
HTTP42858 DYNLT3P1-201ENST00000378574 347 ntBASIC1.53□□□□□ -2.17
HTTP42858 SNORA70.7-201ENST00000384159 133 ntBASIC1.53□□□□□ -2.17
HTTP42858 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.53□□□□□ -2.17
HTTP42858 SEC63P1-201ENST00000425785 1258 ntBASIC1.53□□□□□ -2.17
HTTP42858 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.53□□□□□ -2.17
HTTP42858 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.53□□□□□ -2.17
HTTP42858 AC097504.2-201ENST00000608088 454 ntBASIC1.53□□□□□ -2.17
HTTP42858 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
HTTP42858 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HTTP42858 RPL35AP22-201ENST00000436855 335 ntBASIC1.52□□□□□ -2.17
HTTP42858 RN7SKP265-201ENST00000516448 223 ntBASIC1.52□□□□□ -2.17
HTTP42858 AC022513.1-201ENST00000624512 117 ntBASIC1.52□□□□□ -2.17
HTTP42858 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HTTP42858 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.52□□□□□ -2.17
HTTP42858 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.52□□□□□ -2.17
HTTP42858 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.52□□□□□ -2.17
HTTP42858 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
HTTP42858 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.52□□□□□ -2.17
HTTP42858 MTND4P13-201ENST00000402078 1023 ntBASIC1.51□□□□□ -2.17
HTTP42858 RPS27P5-201ENST00000444247 244 ntBASIC1.51□□□□□ -2.17
HTTP42858 RPS29P20-201ENST00000489592 171 ntBASIC1.51□□□□□ -2.17
HTTP42858 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.51□□□□□ -2.17
HTTP42858 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.51□□□□□ -2.17
HTTP42858 AC104307.1-201ENST00000616142 196 ntBASIC1.51□□□□□ -2.17
HTTP42858 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
HTTP42858 VTRNA1-3-201ENST00000365645 89 ntBASIC1.51□□□□□ -2.17
HTTP42858 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HTTP42858 AIMP1P2-201ENST00000425294 312 ntBASIC1.51□□□□□ -2.17
HTTP42858 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.51□□□□□ -2.17
HTTP42858 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HTTP42858 AL162388.1-201ENST00000450912 352 ntBASIC1.51□□□□□ -2.17
HTTP42858 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.51□□□□□ -2.17
HTTP42858 AL049830.2-201ENST00000480072 201 ntBASIC1.51□□□□□ -2.17
HTTP42858 RNU1-92P-201ENST00000517017 135 ntBASIC1.51□□□□□ -2.17
HTTP42858 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.51□□□□□ -2.17
HTTP42858 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.51□□□□□ -2.17
HTTP42858 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.51□□□□□ -2.17
HTTP42858 CR383656.8-201ENST00000549046 145 ntBASIC1.51□□□□□ -2.17
HTTP42858 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HTTP42858 AC008133.2-201ENST00000624540 351 ntBASIC1.51□□□□□ -2.17
HTTP42858 WARS2P1-201ENST00000429678 537 ntBASIC1.5□□□□□ -2.17
HTTP42858 RPS6P12-201ENST00000432491 726 ntBASIC1.5□□□□□ -2.17
HTTP42858 IFNWP4-201ENST00000453148 294 ntBASIC1.5□□□□□ -2.17
HTTP42858 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.5□□□□□ -2.17
HTTP42858 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.5□□□□□ -2.17
HTTP42858 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.5□□□□□ -2.17
HTTP42858 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
HTTP42858 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.5□□□□□ -2.17
HTTP42858 RNU6-461P-201ENST00000364195 107 ntBASIC1.5□□□□□ -2.17
HTTP42858 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
HTTP42858 DUXAP8-207ENST00000456786 622 ntBASIC1.5□□□□□ -2.17
HTTP42858 AC090071.1-201ENST00000507713 644 ntBASIC1.5□□□□□ -2.17
HTTP42858 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HTTP42858 AC006329.2-201ENST00000611491 394 ntBASIC1.5□□□□□ -2.17
HTTP42858 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
HTTP42858 SGO1P2-201ENST00000429458 1589 ntBASIC1.5□□□□□ -2.17
HTTP42858 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.49□□□□□ -2.17
HTTP42858 RNU1-40P-201ENST00000516816 164 ntBASIC1.49□□□□□ -2.17
HTTP42858 RNU1-97P-201ENST00000516872 164 ntBASIC1.49□□□□□ -2.17
HTTP42858 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HTTP42858 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.49□□□□□ -2.17
HTTP42858 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.49□□□□□ -2.17
HTTP42858 CYP3A137P-201ENST00000562436 69 ntBASIC1.49□□□□□ -2.17
HTTP42858 MIR3935-201ENST00000583472 104 ntBASIC1.49□□□□□ -2.17
HTTP42858 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.49□□□□□ -2.17
HTTP42858 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.49□□□□□ -2.17
HTTP42858 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HTTP42858 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms