Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.6□□□□□ -1.83
ABCD3P28288 RN7SL703P-201ENST00000578485 302 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.6□□□□□ -1.83
ABCD3P28288 NRBF2P1-201ENST00000587407 859 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 AC093227.2-201ENST00000589357 285 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.6□□□□□ -1.83
ABCD3P28288 AC244505.7-201ENST00000599675 272 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 AC015726.1-201ENST00000602353 681 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 DUXAP4-201ENST00000603046 613 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 RN7SKP299-201ENST00000606679 301 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 MIR6076-201ENST00000617521 113 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ABCD3P28288 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.6□□□□□ -1.83
ABCD3P28288 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.6□□□□□ -1.83
ABCD3P28288 AC110801.1-201ENST00000623590 212 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.6□□□□□ -1.83
ABCD3P28288 PISRT1-201ENST00000626175 531 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 AC090582.1-201ENST00000636321 199 ntBASIC3.6□□□□□ -1.83
ABCD3P28288 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ABCD3P28288 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.6□□□□□ -1.83
ABCD3P28288 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
ABCD3P28288 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.59□□□□□ -1.83
ABCD3P28288 FARSBP1-201ENST00000435808 1778 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ABCD3P28288 OR1S2-201ENST00000302592 978 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.59□□□□□ -1.83
ABCD3P28288 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ABCD3P28288 U3.11-201ENST00000364476 212 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ABCD3P28288 RPL23AP32-201ENST00000395315 459 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 RPL7P60-201ENST00000397636 735 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.59□□□□□ -1.83
ABCD3P28288 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.59□□□□□ -1.83
ABCD3P28288 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.59□□□□□ -1.83
ABCD3P28288 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.59□□□□□ -1.83
ABCD3P28288 HMGN2P20-201ENST00000437531 273 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.59□□□□□ -1.83
ABCD3P28288 AC020550.1-201ENST00000447385 163 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.59□□□□□ -1.83
ABCD3P28288 SNORD97-201ENST00000459187 142 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 RPS20P22-201ENST00000473700 357 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ABCD3P28288 MTND1P3-201ENST00000484956 952 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 AC010587.1-201ENST00000505809 469 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 ARL2BPP4-201ENST00000506854 471 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 RNU2-10P-201ENST00000516375 211 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 NARSP2-201ENST00000518524 679 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.59□□□□□ -1.83
ABCD3P28288 OR5G4P-201ENST00000525251 760 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 AC004024.1-201ENST00000549244 247 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.59□□□□□ -1.83
ABCD3P28288 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.59□□□□□ -1.83
ABCD3P28288 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.59□□□□□ -1.83
ABCD3P28288 AL451064.1-201ENST00000607718 471 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 AC245008.1-201ENST00000608123 476 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 AC109347.2-201ENST00000610220 349 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 AC091304.9-201ENST00000612091 226 ntBASIC3.59□□□□□ -1.83
ABCD3P28288 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.59□□□□□ -1.83
ABCD3P28288 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ABCD3P28288 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.59□□□□□ -1.83
ABCD3P28288 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ABCD3P28288 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
ABCD3P28288 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
ABCD3P28288 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ABCD3P28288 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.59□□□□□ -1.84
ABCD3P28288 TPTE2P4-201ENST00000258589 1605 ntBASIC3.59□□□□□ -1.84
ABCD3P28288 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.58□□□□□ -1.84
ABCD3P28288 Y_RNA.201-201ENST00000364052 96 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 RN7SKP280-201ENST00000364196 304 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCD3P28288 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
ABCD3P28288 RNU6-741P-201ENST00000383889 107 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 RPS4XP3-201ENST00000398541 413 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.58□□□□□ -1.84
ABCD3P28288 HMGB3P23-201ENST00000414981 585 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCD3P28288 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AL589872.1-201ENST00000426602 288 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 RPL7P2-201ENST00000427639 268 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC087650.1-201ENST00000431445 468 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 ATP5HP2-201ENST00000433885 485 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.58□□□□□ -1.84
ABCD3P28288 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ABCD3P28288 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 RPS29P7-201ENST00000439662 171 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.58□□□□□ -1.84
ABCD3P28288 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCD3P28288 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.58□□□□□ -1.84
ABCD3P28288 CBWD4P-201ENST00000445695 655 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AP000936.2-201ENST00000447151 681 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 MTND1P29-201ENST00000448112 647 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC140076.1-201ENST00000449897 361 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCD3P28288 AL672167.3-201ENST00000465951 960 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.58□□□□□ -1.84
ABCD3P28288 AC026726.1-201ENST00000512859 601 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCD3P28288 AC114797.1-201ENST00000514003 728 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCD3P28288 ATP5F1P5-201ENST00000526403 760 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms