Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.26□□□□□ -1.73
POLR2AP24928 AL359999.1-201ENST00000604513 294 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AL050343.2-201ENST00000607338 280 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AC024940.5-201ENST00000622889 474 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AC134503.1-201ENST00000633048 54 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
POLR2AP24928 MAPK10-320ENST00000641462 6696 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
POLR2AP24928 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.26□□□□□ -1.73
POLR2AP24928 AC090337.1-201ENST00000579651 2074 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
POLR2AP24928 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 CKAP2P1-201ENST00000555477 2049 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 Y_RNA.381-201ENST00000365666 102 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 RNU6-657P-201ENST00000383904 107 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 Y_RNA.450-201ENST00000384198 113 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
POLR2AP24928 RN7SKP53-201ENST00000411337 315 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.25□□□□□ -1.73
POLR2AP24928 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.25□□□□□ -1.73
POLR2AP24928 AC005534.2-201ENST00000431047 433 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 GTF2IP20-201ENST00000431663 360 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.25□□□□□ -1.73
POLR2AP24928 RNU6-1281P-201ENST00000516223 105 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 RNU6-201P-201ENST00000517100 61 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 HSPE1P3-201ENST00000559254 309 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 HMGB1P6-201ENST00000569046 646 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.25□□□□□ -1.73
POLR2AP24928 AP000553.6-201ENST00000641242 118 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
POLR2AP24928 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
POLR2AP24928 AL353743.1-202ENST00000431724 1695 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
POLR2AP24928 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
POLR2AP24928 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.25□□□□□ -1.73
POLR2AP24928 SNORA38.1-201ENST00000364172 131 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 SNORD81.2-201ENST00000365153 76 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
POLR2AP24928 SNORA51.6-201ENST00000384151 125 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 RNU6-1160P-201ENST00000384546 104 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 MIR606-201ENST00000384851 96 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 RNU6-1068P-201ENST00000410958 103 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.25□□□□□ -1.73
POLR2AP24928 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.25□□□□□ -1.73
POLR2AP24928 FTH1P24-201ENST00000503502 462 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.25□□□□□ -1.73
POLR2AP24928 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.25□□□□□ -1.73
POLR2AP24928 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.25□□□□□ -1.73
POLR2AP24928 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
POLR2AP24928 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
POLR2AP24928 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.25□□□□□ -1.73
POLR2AP24928 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.25□□□□□ -1.73
POLR2AP24928 MIR3936-201ENST00000584304 110 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.25□□□□□ -1.73
POLR2AP24928 Y_RNA.812-201ENST00000610788 101 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 Y_RNA.784-201ENST00000613803 101 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 Y_RNA.787-201ENST00000616522 101 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 Y_RNA.780-201ENST00000617336 101 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 Y_RNA.801-201ENST00000619005 101 ntBASIC4.25□□□□□ -1.73
POLR2AP24928 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
POLR2AP24928 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
POLR2AP24928 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
POLR2AP24928 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
POLR2AP24928 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
POLR2AP24928 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
POLR2AP24928 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
POLR2AP24928 Y_RNA.255-201ENST00000364581 97 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 Y_RNA.419-201ENST00000384041 102 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 SNORA51.12-201ENST00000384448 134 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 MIR559-201ENST00000385188 96 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 RNU6-1009P-201ENST00000390996 107 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 RNA5SP306-201ENST00000411087 107 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
POLR2AP24928 ELOCP4-201ENST00000420090 333 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.24□□□□□ -1.73
POLR2AP24928 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.24□□□□□ -1.73
POLR2AP24928 AC012170.1-201ENST00000495139 359 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.24□□□□□ -1.73
POLR2AP24928 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
POLR2AP24928 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.24□□□□□ -1.73
POLR2AP24928 Y_RNA.672-201ENST00000516289 104 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 Vault.3-201ENST00000516676 95 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.24□□□□□ -1.73
POLR2AP24928 SUMO2P20-201ENST00000520803 283 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 AC078814.3-201ENST00000553036 491 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.24□□□□□ -1.73
POLR2AP24928 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.24□□□□□ -1.73
POLR2AP24928 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.24□□□□□ -1.73
POLR2AP24928 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.24□□□□□ -1.73
POLR2AP24928 AC005498.1-201ENST00000592125 465 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 AC006363.1-201ENST00000603806 463 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 AC233309.1-201ENST00000619522 751 ntBASIC4.24□□□□□ -1.73
POLR2AP24928 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms